Analyze Plate 4 and rerun analysis + IC with CellProfiler Parallel #17
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gwaybio
approved these changes
Jul 17, 2023
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Regarding the size of the SQLite file, the maximum size is ~ 330 MB. Git LFS can hold files up to 5 GB, so I think we can keep these on GitHub for now unless needs change. As well, as discussed in the group, I will rerun the analysis at a later date that calculates the Zernike features + increase the number of workers to see if that improves computational time. I will merge this PR now, thank you for the review! |
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In this PR, we process Plate 4 images with IC and run the analysis.
At the same time, I am running all the past plates again through IC and analysis with CellProfiler parallel to see how it improves processing speed/computation time.