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Update concat plate UMAP embeddings #49

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jenna-tomkinson
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Update concat plate UMAP embeddings

In this PR, the concat UMAP embeddings were updated to remove Plate 4 controls as we moved in a different direction with the manuscript. Additionally, the NF1 environment had to be updated due to CellProfiler breaking all of a sudden. This might lead to small changes with pycytominer processing since versions might have changed in env, unfortunately.

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@MattsonCam MattsonCam left a comment

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LGTM @jenna-tomkinson, good job!

@jenna-tomkinson
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Thanks for the review @MattsonCam! I am merging now!

@jenna-tomkinson jenna-tomkinson merged commit 5535cdf into WayScience:main Jul 30, 2024
@jenna-tomkinson jenna-tomkinson deleted the update_umap_embeddings branch July 30, 2024 15:44
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