bump version

docs/source/installation.md

@@ -1,8 +1,9 @@
-# {octicon}`terminal` Installation 
-Bento requires Python version 3.8 or 3.9. Only Python 3.8 is supported for Windows.
+# {octicon}`terminal` Installation
 
+Bento requires Python version 3.8 or 3.9.
 
 ## Setup a virtual environment
+
 We highly recommend using a virtual environment to install Bento to avoid conflicting dependencies with other packages. If you are unfamiliar with virtual environments, we recommend using [Miniconda](https://docs.conda.io/en/latest/miniconda.html).
 
 To setup a virtual environment with `Miniconda`, run the following. This will create and activate a new environment called `bento` with Python 3.8.
@@ -18,6 +19,7 @@ conda config --env --add channels conda-forge
 
 conda activate bento
 ```
+
 ## 2. Dependencies
 
 Bento makes use of several packages for spatial analyses that require addtional non-Python dependencies.
@@ -37,35 +39,38 @@ conda install -c conda-forge pandoc
 All that's left is the package itself. Install with pip:
 
 ```bash
-pip install bento-tools==2.0.0a0
+pip install bento-tools
 ```
 
 ---
+
 ## Development
+
 The package and its dependencies are built using [Poetry](https://python-poetry.org/).
 
 1. Install [Poetry](https://python-poetry.org/).
 2. Clone the `bento-tools` GitHub repository.
 3. Use poetry to manage dependencies and pip to install the package in editable mode.
 
-    ```bash
-    cd bento-tools
-    poetry install
-    pip install -e .
-    ```
+   ```bash
+   cd bento-tools
+   poetry install
+   pip install -e .
+   ```
 
-    For updating documentation locally, install extra dependencies and launch a live server to preview doc builds:
+   For updating documentation locally, install extra dependencies and launch a live server to preview doc builds:
 
-    First install pandoc (see [dependencies](#Dependencies) section for more details).
+   First install pandoc (see [dependencies](#Dependencies) section for more details).
 
-    ```bash
-    poetry install --extras "docs"
-    pip install -e .\[docs\]
-    cd docs
-    make livehtml # See output for URL
-    ```
+   ```bash
+   poetry install --extras "docs"
+   pip install -e .\[docs\]
+   cd docs
+   make livehtml # See output for URL
+   ```
 
 ---
+
 ## GPU Support (Optional)
-Bento currently only uses GPUs to accelerate tensor decomposition (via [Tensorly](https://tensorly.org/stable/index.html)) GPU support can be enabled by installing PyTorch. We recommend the [PyTorch installation instructions](https://pytorch.org/get-started/locally/) for more details as installation varies by platform.
 
+Bento currently only uses GPUs to accelerate tensor decomposition (via [Tensorly](https://tensorly.org/stable/index.html)) GPU support can be enabled by installing PyTorch. We recommend the [PyTorch installation instructions](https://pytorch.org/get-started/locally/) for more details as installation varies by platform.

pyproject.toml

@@ -6,7 +6,7 @@ include = [
     "bento/models/**/*",
     "bento/tools/gene_sets/*",
 ]
-version = "2.0.0a0"
+version = "2.0.0"
 description = "A toolkit for subcellular analysis of spatial transcriptomics data"
 authors = ["Clarence Mah <ckmah@ucsd.edu>"]
 license = "BSD-2-Clause"