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ZuckermanLab

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  1. BayesianBootstrap BayesianBootstrap Public

    Python 4 2

  2. NMpathAnalysis NMpathAnalysis Public

    Jupyter Notebook 3 4

  3. pyGridSampler pyGridSampler Public

    An adaptive grid-based sampling method using iterative batch sizes

    Jupyter Notebook 3 2

  4. mrmc mrmc Public

    Mixed Resolution Monte Carlo simulation

    C++ 1 2

  5. Bayesian_ITC Bayesian_ITC Public

    Notebook for Bayesian analysis of isothermal titration calorimetry using a two-step binding model

    Jupyter Notebook 1

  6. pyPAM pyPAM Public

    A parallel extension of the affine invariant ensemble sampler w/ optional ensemble mixing

    Python 1 1

Repositories

Showing 10 of 26 repositories
  • msm_we Public

    This is a package for doing history-augmented MSM (haMSM) analysis on weighted ensemble trajectories.

    ZuckermanLab/msm_we’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Nov 19, 2024
  • celltraj Public Forked from jcopperm/celltraj

    Live-cell imaging cell-state trajectory embedding

    ZuckermanLab/celltraj’s past year of commit activity
    Python 0 MIT 2 0 0 Updated Nov 2, 2024
  • CellTrajAnl Public

    Analysis of cell state transition dynamics from the brightfield microscopy images of MCF10A cells treated with ligands EGF, OSM, TGF-beta, and their combinations.

    ZuckermanLab/CellTrajAnl’s past year of commit activity
    0 GPL-3.0 0 0 0 Updated Nov 2, 2024
  • coding2024 Public

    Materials for introductory coding class - Summer 2024

    ZuckermanLab/coding2024’s past year of commit activity
    Jupyter Notebook 0 3 0 0 Updated Jul 26, 2024
  • ModelExplorer Public
    ZuckermanLab/ModelExplorer’s past year of commit activity
    Perl 0 GPL-3.0 0 0 0 Updated Feb 17, 2024
  • Bayesian_Transporter Public

    Transporter mechanism identification using Bayesian inference

    ZuckermanLab/Bayesian_Transporter’s past year of commit activity
    Jupyter Notebook 0 1 1 0 Updated Feb 17, 2024
  • BayesianBootstrap Public
    ZuckermanLab/BayesianBootstrap’s past year of commit activity
    Python 4 2 0 1 Updated Jan 29, 2024
  • Bayesian_Transporter_Paper Public archive Forked from ZuckermanLab/Bayesian_Transporter

    Transporter mechanism identification using Bayesian inference

    ZuckermanLab/Bayesian_Transporter_Paper’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Sep 22, 2023
  • pyPAM Public

    A parallel extension of the affine invariant ensemble sampler w/ optional ensemble mixing

    ZuckermanLab/pyPAM’s past year of commit activity
    Python 1 1 0 0 Updated May 6, 2023
  • pyGridSampler Public

    An adaptive grid-based sampling method using iterative batch sizes

    ZuckermanLab/pyGridSampler’s past year of commit activity
    Jupyter Notebook 3 MIT 2 2 0 Updated Apr 8, 2023
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