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Decompose option
a-xavier edited this page Mar 19, 2019
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decompose allow users to manually decompose their vcf files prior to annotation.
Decomposing vcf files allow remove multi-alleles (eg. REF-A ALT-T,C,GT) loci from vcf files to have a 'one variant per line' file.
python tapes.py decompose -i ./input.vcf -o ./output_decomposed.vcf
The decompose function is using the vcf_parser module.