Merge branch 'main' of https://github.com/abearab/ezformer #29

	name: python-pkg

	on:
	push:
	branches: [ "main" ]
	pull_request:
	branches: [ "main" ]

	jobs:
	build:

	runs-on: self-hosted

	strategy:
	fail-fast: false
	max-parallel: 5

	steps:
	- uses: actions/checkout@v4
	- uses: actions/setup-python@v3
	with:
	python-version: '3.11'
	- name: "Install flake8"
	run: \|
	pip install flake8 tomli
	- name: "Lint with flake8"
	run: \|
	# stop the build if there are Python syntax errors or undefined names
	flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
	# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
	flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
	- name: "Install miniconda"
	uses: conda-incubator/setup-miniconda@v2
	with:
	miniconda-version: "latest"
	auto-update-conda: true
	mamba-version: "*"
	python-version: "3.11"
	channels: conda-forge,bioconda,pytorch,nvidia
	environment-file: environment.yml
	- name: "Install pytest"
	shell: bash -l {0}
	run: \|
	python -m pip install --upgrade pip
	pip install setuptools wheel build pytest tomli
	- name: "Test with pytest"
	shell: bash -l {0}
	run: \|
	pytest -s

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