skip conda setup #32
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name: python-pkg | |
on: | |
push: | |
branches: [ "main" ] | |
pull_request: | |
branches: [ "main" ] | |
jobs: | |
build: | |
runs-on: self-hosted | |
strategy: | |
fail-fast: false | |
max-parallel: 5 | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: actions/setup-python@v3 | |
with: | |
python-version: '3.11' | |
- name: "Install flake8" | |
run: | | |
pip install flake8 tomli | |
- name: "Lint with flake8" | |
run: | | |
# stop the build if there are Python syntax errors or undefined names | |
flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
# - name: "Install miniconda" | |
# uses: conda-incubator/setup-miniconda@v3 | |
# with: | |
# miniconda-version: "latest" | |
# auto-update-conda: true | |
# mamba-version: "*" | |
# python-version: "3.11" | |
# channels: conda-forge,bioconda,pytorch,nvidia | |
# - name: "Create conda environment" | |
# run: | | |
# conda env create -f environment.yml | |
# conda activate ezformer | |
- name: "Install pytest" | |
shell: bash -l {0} | |
run: | | |
python -m pip install --upgrade pip | |
pip install setuptools wheel build pytest tomli | |
- name: "Build package" | |
run: | | |
pip install -e . | |
- name: "Test with pytest" | |
shell: bash -l {0} | |
run: | | |
pytest -s |