Update dependencies

[abey79]

Description

• pin Shapely to 1.8.2
• update deps
• remove explicit install of geos from CI

Fixes #424

Checklist

• feature/fix implemented
• code formatting ok (black and isort)
• mypy returns no error
• tests added/updated and pytest succeeds
• documentation added/updated
  • command docstring and option/argument help
  • README.md updated (Feature Overview)
  • CHANGELOG.md updated
  • added new command to reference.rst
  • RTD doc updated and building with no error (make clean && make html in docs/)

[codecov]

Codecov Report

Merging #475 (59c8e9e) into master (ab39d5b) will not change coverage.
The diff coverage is n/a.

❗ Current head 59c8e9e differs from pull request most recent head 0f2bbf3. Consider uploading reports for the commit 0f2bbf3 to get more accurate results

@@           Coverage Diff           @@
##           master     #475   +/-   ##
=======================================
  Coverage   94.38%   94.38%           
=======================================
  Files          60       60           
  Lines        5396     5396           
  Branches      786      786           
=======================================
  Hits         5093     5093           
  Misses        185      185           
  Partials      118      118           

---

Continue to review full report at Codecov.

Legend - Click here to learn more
Δ = absolute <relative> (impact), ø = not affected, ? = missing data
Powered by Codecov. Last update ab39d5b...0f2bbf3. Read the comment docs.

[sonarqubecloud]

Kudos, SonarCloud Quality Gate passed!   

0 Bugs
0 Vulnerabilities
0 Security Hotspots
0 Code Smells

No Coverage information
No Duplication information