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Error while creating Krona plots #246
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Hello, @VictorBenedito |
alexeigurevich
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Sep 8, 2023
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2023-06-21 12:07:40
Summarizing results...
Text versions of reports and plots for each metric (for all references and assemblies) are saved to /MP_Data/speedypipe/USER189_PROJECT189/results/M1/metaquast/summary/
Icarus (contig browser) is saved to /MP_Data/speedypipe/USER189_PROJECT189/results/M1/metaquast/icarus.html
Drawing interactive Krona plots...
'NoneType' object is not iterable
Traceback (most recent call last):
File "/home/ocardenas/.local/bin/metaquast.py", line 427, in
return_code = main(sys.argv[1:])
File "/home/ocardenas/.local/bin/metaquast.py", line 417, in main
html_saver.create_meta_report(output_dirpath, json_texts)
File "/home/ocardenas/.local/lib/python3.9/site-packages/quast_libs/html_saver/html_saver.py", line 257, in create_meta_report
create_krona_charts(taxons_for_krona, meta_log, results_dirpath, json_texts)
File "/home/ocardenas/.local/lib/python3.9/site-packages/quast_libs/html_saver/html_saver.py", line 363, in create_krona_charts
for section in report:
TypeError: 'NoneType' object is not iterable
ERROR! exception caught!
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