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  1. FastKraken FastKraken Public

    Extra fast Kraken2 implementation based on modified scripts from lexinwei and jenniferlu717

    Python

  2. Genepuller-Fungal-MLST Genepuller-Fungal-MLST Public

    Blast wrapper script for pulling relevant genes from fungal (or indeed any) genomes for MLST

    Jupyter Notebook

  3. WSSU-Nanopore-Workshop-Fall2023 WSSU-Nanopore-Workshop-Fall2023 Public

    Jupyter notebook files for bioinformatics portion of Space Microbiology Nanopore Workshop at Winston-Salem State University in Fall of 2023

    Jupyter Notebook