travis

aces · Feb 4, 2020 · 6ac387e · 6ac387e
1 parent 355289d
commit 6ac387e
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Showing 2 changed files with 34 additions and 18 deletions.
diff --git a/modules/electrophysiology_browser/php/module.class.inc b/modules/electrophysiology_browser/php/module.class.inc
@@ -36,11 +36,11 @@ class Module extends \Module
     {
         return parent::hasAccess($user) &&
             $user->hasAnyPermission(
-            [
-                'electrophysiology_browser_view_allsites',
-                'electrophysiology_browser_view_site'
-            ]
-        );
+                [
+                    'electrophysiology_browser_view_allsites',
+                    'electrophysiology_browser_view_site'
+                ]
+            );
     }
 
     /**

diff --git a/modules/electrophysiology_browser/php/sessions.class.inc b/modules/electrophysiology_browser/php/sessions.class.inc
@@ -161,7 +161,9 @@ class Sessions extends \NDB_Page
         $sessions            = $db->pselect($query, array());
         $sessions            = array_column($sessions, 'SessionID');
         $response['patient'] = $this->getSubjectData($outputType);
-        $response['database']    = array_values($this->getFilesData($sessionID, $outputType));
+        $response['database']    = array_values(
+            $this->getFilesData($sessionID, $outputType)
+        );
         $response['sessions']    = $sessions;
         $currentIndex            = array_search($sessionID, $sessions);
         $response['nextSession'] = $sessions[$currentIndex+1] ?? '';
@@ -181,7 +183,9 @@ class Sessions extends \NDB_Page
     function getSubjectData($outputType)
     {
         $subjectData = array();
-        $candidate   = \NDB_Factory::singleton()->candidate($this->timepoint->getCandID());
+        $candidate   = \NDB_Factory::singleton()->candidate(
+            $this->timepoint->getCandID()
+        );
 
         $subjectData['pscid']       = $candidate->getPSCID();
         $subjectData['dccid']       = $candidate->getCandID();
@@ -236,8 +240,12 @@ class Sessions extends \NDB_Page
             $fileSummary         = array();
             $physiologicalFileID = $file['PhysiologicalFileID'];
             $physiologicalFile   = $file['FilePath'];
-            $physioFileObj       = new ElectrophysioFile(intval($physiologicalFileID));
-            $fileName            = basename($physioFileObj->getParameter('FilePath'));
+            $physioFileObj       = new ElectrophysioFile(
+                intval($physiologicalFileID)
+            );
+            $fileName            = basename(
+                $physioFileObj->getParameter('FilePath')
+            );
 
             // -----------------------------------------------------
             // Create a file summary object with file's information
@@ -298,13 +306,21 @@ class Sessions extends \NDB_Page
             $intituteAddress  = $physioFileObj->getParameter('InstitutionAddress');
             $miscChannelCount = $physioFileObj->getParameter('MiscChannelCount');
             $manufacturer     = $physioFileObj->getParameter('Manufacturer');
-            $modelName        = $physioFileObj->getParameter('ManufacturerModelName');
-            $capManufacturer  = $physioFileObj->getParameter('ManufacturerCapModelName');
-            $capModelName     = $physioFileObj->getParameter('ManufacturerCapModelName');
+            $modelName        = $physioFileObj->getParameter(
+                'ManufacturerModelName'
+            );
+            $capManufacturer  = $physioFileObj->getParameter(
+                'ManufacturerCapModelName'
+            );
+            $capModelName     = $physioFileObj->getParameter(
+                'ManufacturerCapModelName'
+            );
             $hardwareFilters  = $physioFileObj->getParameter('HardwareFilters');
             $duration         = $physioFileObj->getParameter('RecordingDuration');
             $epochLength      = $physioFileObj->getParameter('EpochLength');
-            $softwareVersion  = $physioFileObj->getParameter('DeviceSoftwareVersion');
+            $softwareVersion  = $physioFileObj->getParameter(
+                'DeviceSoftwareVersion'
+            );
             $serialNumber     = $physioFileObj->getParameter('DeviceSerialNumber');
             $artefactDesc     = $physioFileObj->getParameter(
                 'SubjectArtefactDescription'
@@ -352,22 +368,22 @@ class Sessions extends \NDB_Page
      * Gets the download link for the files associated to the electrophysiology
      * file (channels.tsv, electrodes.tsv, task events.tsv...)
      *
-     * @param int    $physiologicalFileID FileID of the electrophysiology file
-     * @param string $physiologicalFile   electrophysiology file's relative path
+     * @param int    $physioFileID FileID of the electrophysiology file
+     * @param string $physioFile   electrophysiology file's relative path
      *
      * @return array array with the path to the different files associated to the
      *               electrophysiology file
      */
-    function getDownloadlinks(int $physiologicalFileID, string $physiologicalFile): array
+    function getDownloadlinks(int $physioFileID, string $physioFile): array
     {
         $db = \NDB_Factory::singleton()->database();
 
         $params          = array();
-        $params['PFID']  = $physiologicalFileID;
+        $params['PFID']  = $physioFileID;
         $downloadLinks   = array();
         $downloadLinks[] = array(
             'type' => 'physiological_file',
-            'file' => $physiologicalFile,
+            'file' => $physioFile,
         );
 
         $queries = [