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1. brainglobe/cellfinder brainglobe/cellfinder Public

   Automated 3D cell detection in very large images

   Python 181 39

2. brainglobe/brainreg brainglobe/brainreg Public

   Automated 3D brain registration with support for multiple species and atlases.

   Python 123 28

3. brainglobe/brainglobe-atlasapi brainglobe/brainglobe-atlasapi Public

   A lightweight python module to interact with atlases for systems neuroscience

   Python 127 33

4. brainglobe/brainrender brainglobe/brainrender Public

   a python based software for visualization of neuroanatomical and morphological data.

   Python 547 78

5. neuroinformatics-unit/python-cookiecutter neuroinformatics-unit/python-cookiecutter Public

   Utility to create a basic Python project structure with tests, CI etc.

   Python 24 3

6. neuroinformatics-unit/movement neuroinformatics-unit/movement Public

   Python tools for analysing body movements across space and time

   Python 105 8