Added condition to handle empty eRegulons
after build_grn
#538
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Sometimes,
build_grn
may return an empty list ofeRegulons
. This is more likely to occur when stricter thresholds are used for the parametersmin_target_genes
,rho_threshold
, ormin_regions_per_gene
. To address this, a condition has been added to handle empty results gracefully, instead of raising an error in_format_egrns
.