No Heatmap Generated for the custom genome in Juicebox v 1.11 in Ubuntu and HiC version 9 file

[senthilk88]

Hi
I tried to open a Hic file for our custom genome but it failed to open in juicebox version 1.11 in a linux computer running ubuntu 22.04 LTS and java openjdk 19.0.2 2023-01-17
, but HiC files with version 7 and 8 opens in Juicebox. The same version 9 file opens when its opened in a Windows computer

The error message is as below

HiC file version: 9
java.lang.IndexOutOfBoundsException: Index 0 out of bounds for length 0
at java.base/jdk.internal.util.Preconditions.outOfBounds(Preconditions.java:100)
at java.base/jdk.internal.util.Preconditions.outOfBoundsCheckIndex(Preconditions.java:106)
at java.base/jdk.internal.util.Preconditions.checkIndex(Preconditions.java:302)
at java.base/java.util.Objects.checkIndex(Objects.java:385)
at java.base/java.util.ArrayList.set(ArrayList.java:441)
at juicebox.data.ChromosomeHandler.(ChromosomeHandler.java:55)
at juicebox.data.DatasetReaderV2.read(DatasetReaderV2.java:183)
at juicebox.gui.SuperAdapter.unsafeLoad(SuperAdapter.java:416)
at juicebox.gui.SuperAdapter.unsafeLoadWithTitleFix(SuperAdapter.java:514)
at juicebox.gui.SuperAdapter$2.run(SuperAdapter.java:496)
at juicebox.MainWindow$3.call(MainWindow.java:446)
at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:317)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1144)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:642)
at java.base/java.lang.Thread.run(Thread.java:1589)

Thanks in advance