CI #1713
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: CI | |
| on: | |
| push: | |
| branches: | |
| - master | |
| pull_request: | |
| branches: | |
| - master | |
| schedule: | |
| - cron: '0 18 * * *' | |
| env: | |
| CARGO_TERM_COLOR: always | |
| jobs: | |
| lint: | |
| name: lint | |
| runs-on: ubuntu-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - {command: fmt, rust: nightly} | |
| - {command: clippy, rust: stable} | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v3 | |
| - name: Install Rust (${{matrix.rust}}) | |
| uses: dtolnay/rust-toolchain@stable | |
| with: {toolchain: '${{matrix.rust}}', components: 'rustfmt, clippy'} | |
| - name: Install HDF5 | |
| run: sudo apt-get install libhdf5-dev | |
| - name: Run cargo ${{matrix.command}} | |
| run: cargo ${{matrix.command}} ${{matrix.command == 'fmt' && '--all -- --check' || '--workspace --exclude hdf5-src -- -D warnings -D clippy::cargo -A clippy::multiple-crate-versions'}} | |
| doc: # This task should mirror the procedure on docs.rs | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v3 | |
| with: {submodules: true} | |
| - name: Install Rust (${{matrix.rust}}) | |
| uses: dtolnay/rust-toolchain@stable | |
| with: {toolchain: nightly} | |
| - name: Document workspace | |
| env: | |
| RUSTDOCFLAGS: "--cfg docsrs" | |
| run: cargo doc --features static,zlib,blosc,lzf,f16,complex | |
| brew: | |
| name: brew | |
| runs-on: macos-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - {version: hdf5@1.8} | |
| - {version: hdf5@1.10} | |
| - {version: hdf5@1.14} | |
| - {version: hdf5-mpi, mpi: true} | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v3 | |
| with: {submodules: true} | |
| - name: Install Rust (${{matrix.rust}}) | |
| uses: dtolnay/rust-toolchain@stable | |
| with: {toolchain: stable} | |
| - name: Install HDF5 (${{matrix.version}}) | |
| run: brew install ${{matrix.version}} | |
| - name: Build and test all crates | |
| run: | | |
| [ "${{matrix.mpi}}" != "" ] && FEATURES=mpio | |
| cargo test -vv --features="$FEATURES" | |
| conda: | |
| name: conda | |
| runs-on: ${{matrix.os}}-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - {os: ubuntu, version: 1.8.16, channel: conda-forge, rust: stable} | |
| - {os: windows, version: 1.8.17, channel: conda-forge, rust: stable} | |
| - {os: macos, version: 1.8.18, channel: anaconda, rust: stable} | |
| - {os: ubuntu, version: 1.8.20, channel: anaconda, rust: beta} | |
| - {os: ubuntu, version: 1.10.1, channel: anaconda, rust: nightly} | |
| - {os: windows, version: 1.10.2, channel: anaconda, rust: beta} | |
| - {os: ubuntu, version: 1.10.3, channel: conda-forge, rust: nightly} | |
| - {os: windows, version: 1.10.4, channel: anaconda, rust: nightly} | |
| - {os: ubuntu, version: 1.10.4, mpi: openmpi, channel: conda-forge, rust: stable} | |
| - {os: ubuntu, version: 1.10.5, channel: conda-forge, rust: beta} | |
| - {os: macos, version: 1.10.5, mpi: openmpi, channel: conda-forge, rust: beta} | |
| - {os: ubuntu, version: 1.10.6, channel: anaconda, rust: stable} | |
| - {os: ubuntu, version: 1.10.6, mpi: mpich, channel: conda-forge, rust: nightly} | |
| # - {os: ubuntu, version: 1.10.8, channel: conda-forge, rust: stable} | |
| - {os: ubuntu, version: 1.12.0, mpi: openmpi, channel: conda-forge, rust: stable} | |
| - {os: macos, version: 1.12.0, channel: conda-forge, rust: stable} | |
| - {os: windows, version: 1.12.0, channel: conda-forge, rust: stable} | |
| - {os: ubuntu, version: 1.12.1, channel: conda-forge, rust: stable} | |
| - {os: macos, version: 1.14.0, channel: conda-forge, rust: stable} | |
| - {os: windows, version: 1.14.0, channel: conda-forge, rust: stable} | |
| - {os: ubuntu, version: 1.14.0, channel: conda-forge, rust: stable} | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v3 | |
| with: {submodules: true} | |
| - name: Install Rust (${{matrix.rust}}) | |
| uses: dtolnay/rust-toolchain@stable | |
| with: {toolchain: '${{matrix.rust}}'} | |
| - name: Install conda | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: {auto-update-conda: false, activate-environment: testenv} | |
| - name: Install HDF5 (${{matrix.version}}${{matrix.mpi && '-' || ''}}${{matrix.mpi}}) | |
| run: | | |
| [ "${{matrix.mpi}}" != "" ] && MPICC_PKG=${{matrix.mpi}}-mpicc | |
| conda install -y -c ${{matrix.channel}} 'hdf5=${{matrix.version}}=*${{matrix.mpi}}*' $MPICC_PKG | |
| - name: Build and test all crates | |
| run: | | |
| export HDF5_DIR="$CONDA_PREFIX" | |
| [ "${{matrix.mpi}}" != "" ] && FEATURES=mpio | |
| [ "${{runner.os}}" != "Windows" ] && export RUSTFLAGS="-C link-args=-Wl,-rpath,$CONDA_PREFIX/lib" | |
| [ "${{matrix.mpi}}" == "mpich" ] && [ "${{runner.os}}" == "Linux" ] && export MPICH_CC=$(which gcc) | |
| [ "${{matrix.mpi}}" == "openmpi" ] && [ "${{runner.os}}" == "Linux" ] && export OMPI_CC=$(which gcc) | |
| cargo test -vv --features="$FEATURES" | |
| static: | |
| name: static | |
| runs-on: ${{matrix.os}}-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - {os: ubuntu, rust: stable} | |
| - {os: windows, rust: stable-msvc} | |
| - {os: windows, rust: stable-gnu} | |
| - {os: macos, rust: stable} | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v3 | |
| with: {submodules: true} | |
| - name: Install Rust (${{matrix.rust}}) | |
| uses: dtolnay/rust-toolchain@stable | |
| with: {toolchain: '${{matrix.rust}}'} | |
| - name: Build and test all crates | |
| run: cargo test --workspace -v --features hdf5-sys/static,hdf5-sys/zlib --exclude hdf5-derive | |
| - name: Build and test with filters and other features | |
| run: cargo test --workspace -v --features hdf5-sys/static,hdf5-sys/zlib,lzf,blosc,f16,complex --exclude hdf5-derive | |
| if: matrix.rust != 'stable-gnu' | |
| - name: Run examples | |
| run: | | |
| cargo r --example simple --features hdf5-sys/static,hdf5-sys/zlib,lzf,blosc | |
| cargo r --example chunking --features hdf5-sys/static,hdf5-sys/zlib,lzf,blosc | |
| if: matrix.rust != 'stable-gnu' | |
| apt: | |
| name: apt | |
| runs-on: ubuntu-20.04 | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - {mpi: mpich, rust: beta} | |
| - {mpi: openmpi, rust: stable} | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v3 | |
| with: {submodules: true} | |
| - name: Install Rust (${{matrix.rust}}) | |
| uses: dtolnay/rust-toolchain@stable | |
| with: {toolchain: '${{matrix.rust}}'} | |
| - name: Install HDF5 (${{matrix.mpi}}) | |
| run: | | |
| [ "${{matrix.mpi}}" == "mpich" ] && PACKAGES="libhdf5-mpich-dev mpich" | |
| [ "${{matrix.mpi}}" == "openmpi" ] && PACKAGES="libhdf5-openmpi-dev openmpi-bin" | |
| [ "${{matrix.mpi}}" == "serial" ] && PACKAGES="libhdf5-dev" | |
| sudo apt-get install $PACKAGES | |
| - name: Build and test all crates | |
| run: | | |
| [ "${{matrix.mpi}}" != "serial" ] && FEATURES=mpio | |
| cargo test -vv --features="$FEATURES" | |
| - name: Test crate for locking on synchronisation | |
| run: | | |
| [ "${{matrix.mpi}}" != "serial" ] && FEATURES=mpio | |
| cargo test -vv --features="$FEATURES" -- lock_part | |
| cargo test -vv --features="$FEATURES" -- lock_part | |
| cargo test -vv --features="$FEATURES" -- lock_part | |
| msi: | |
| name: msi | |
| runs-on: windows-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| rust: [stable] | |
| version: ["1.8", "1.10", "1.12", "1.14"] | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v3 | |
| with: {submodules: true} | |
| - name: Install Rust (${{matrix.rust}}) | |
| uses: dtolnay/rust-toolchain@stable | |
| with: {toolchain: '${{matrix.rust}}'} | |
| - name: Configure environment | |
| shell: bash | |
| run: | | |
| if [[ "${{matrix.version}}" == "1.8" ]]; then | |
| VERSION=1.8.21 | |
| DL_PATH=hdf5-1.8.21-Std-win7_64-vs14.zip | |
| echo "MSI_PATH=hdf\\HDF5-1.8.21-win64.msi" >> $GITHUB_ENV | |
| elif [[ "${{matrix.version}}" == "1.10" ]]; then | |
| VERSION=1.10.0 | |
| DL_PATH=windows/extra/hdf5-1.10.0-win64-VS2015-shared.zip | |
| echo "MSI_PATH=hdf5\\HDF5-1.10.0-win64.msi" >> $GITHUB_ENV | |
| elif [[ "${{matrix.version}}" == "1.12" ]]; then | |
| VERSION=1.12.0 | |
| DL_PATH=hdf5-1.12.0-Std-win10_64-vs16.zip | |
| echo "MSI_PATH=hdf\\HDF5-1.12.0-win64.msi" >> $GITHUB_ENV | |
| else | |
| VERSION=1.14.0 | |
| DL_PATH=windows/hdf5-1.14.0-Std-win10_64-vs16.zip | |
| echo "MSI_PATH=hdf\\HDF5-1.14.0-win64.msi" >> $GITHUB_ENV | |
| fi | |
| BASE_URL=https://support.hdfgroup.org/ftp/HDF5/releases | |
| echo "DL_URL=$BASE_URL/hdf5-${{matrix.version}}/hdf5-$VERSION/bin/$DL_PATH" >> $GITHUB_ENV | |
| echo "C:\\Program Files\\HDF_Group\\HDF5\\$VERSION\\bin" >> $GITHUB_PATH | |
| - name: Install HDF5 (${{matrix.version}}) | |
| shell: pwsh | |
| run: | | |
| C:\msys64\usr\bin\wget.exe -q -O hdf5.zip ${{env.DL_URL}} | |
| 7z x hdf5.zip -y | |
| msiexec /i ${{env.MSI_PATH}} /quiet /qn /norestart | |
| - name: Build and test all crates | |
| run: cargo test -vv | |
| mingw: | |
| name: mingw | |
| runs-on: windows-latest | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| rust: [stable] | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v3 | |
| with: {submodules: true} | |
| - name: Install Rust (${{matrix.rust}}) | |
| uses: dtolnay/rust-toolchain@stable | |
| with: {toolchain: '${{matrix.rust}}', targets: x86_64-pc-windows-gnu} | |
| - name: Install HDF5 | |
| shell: pwsh | |
| run: | | |
| $env:PATH="$env:PATH;C:\msys64\mingw64\bin;C:\msys64\usr\bin;" | |
| C:\msys64\usr\bin\pacman.exe -Syu --noconfirm | |
| C:\msys64\usr\bin\pacman.exe -S --noconfirm mingw-w64-x86_64-hdf5 mingw-w64-x86_64-pkgconf | |
| - name: Build and test all crates | |
| shell: pwsh | |
| run: | | |
| $env:PATH="$env:PATH;C:\msys64\mingw64\bin;" | |
| cargo test -vv --target=x86_64-pc-windows-gnu | |
| msrv: | |
| name: Minimal Supported Rust Version | |
| runs-on: ubuntu-20.04 | |
| strategy: | |
| fail-fast: false | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v3 | |
| with: {submodules: true} | |
| - name: Install Rust | |
| uses: dtolnay/rust-toolchain@stable | |
| with: {toolchain: 1.64} | |
| - name: Build and test all crates | |
| run: | |
| cargo test --workspace -vv --features=hdf5-sys/static,hdf5-sys/zlib --exclude=hdf5-derive | |
| wine: | |
| name: wine | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v3 | |
| with: {submodules: true} | |
| - name: Install Rust | |
| uses: dtolnay/rust-toolchain@stable | |
| with: {toolchain: stable, targets: x86_64-pc-windows-gnu} | |
| - name: Install dependencies | |
| run: sudo apt-get update && sudo apt install wine64 mingw-w64 | |
| - name: Build and test | |
| env: | |
| CARGO_TARGET_X86_64_PC_WINDOWS_GNU_RUNNER: wine64 | |
| run: cargo test --features hdf5-sys/static --target x86_64-pc-windows-gnu -- --skip test_compile_fail | |
| addr_san: | |
| name: Address sanitizer | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v3 | |
| with: {submodules: true} | |
| - name: Install Rust | |
| uses: dtolnay/rust-toolchain@stable | |
| with: {toolchain: nightly, profile: minimal, override: true} | |
| - name: Run test with sanitizer | |
| env: | |
| RUSTFLAGS: "-Z sanitizer=address" | |
| run: cargo test --features hdf5-sys/static --target x86_64-unknown-linux-gnu --workspace --exclude hdf5-derive |