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Caveat. I've confirmed that this works for diffing. I've not tried the merge command.
Add the following to the .git\config file:
[diff] tool = compareit [merge] tool = compareit [difftool "compareit"] cmd = \\"C:/Program Files (x86)/Compare It!/wincmp3.exe\\" \\"$LOCAL\\" //=\\"Old Version\\" \\"$REMOTE\\" [mergetool "compareit"] cmd = \\"C:/Program Files (x86)/Compare It!/wincmp3.exe\\" \\"$LOCAL\\" //=\\"Old Version\\" \\"$REMOTE\\" trustExitCode = false