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Fixed some CWL translator issues #2603

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Fixed some CWL translator issues

Fixed some CWL translator issues #2603

Triggered via pull request December 17, 2024 21:56
@LanderOttoLanderOtto
synchronize #628
fix/elem-out
Status Failure
Total duration 28m 31s
Artifacts 24

ci-tests.yaml

on: pull_request
Matrix: CWL conformance tests
Matrix: StreamFlow unit tests
StreamFlow CodeQL check
1m 22s
StreamFlow CodeQL check
StreamFlow Docker image tests
1m 8s
StreamFlow Docker image tests
Build Sphinx documentation
21s
Build Sphinx documentation
Matrix: StreamFlow static checks
Matrix: test-flux
Codecov report upload
0s
Codecov report upload
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Annotations

29 errors and 3 warnings
StreamFlow static checks (lint)
Process completed with exit code 2.
CWL conformance tests (ubuntu-22.04, 3.10, v1.1, docker)
Event loop is closed
CWL conformance tests (ubuntu-22.04, 3.10, v1.1, docker)
Event loop is closed
CWL conformance tests (ubuntu-22.04, 3.10, v1.1, docker)
Event loop is closed
CWL conformance tests (ubuntu-22.04, 3.11, v1.1, docker)
Event loop is closed
CWL conformance tests (ubuntu-22.04, 3.11, v1.1, docker)
Event loop is closed
CWL conformance tests (ubuntu-22.04, 3.11, v1.1, docker)
Event loop is closed
CWL conformance tests (ubuntu-22.04, 3.11, v1.1, docker)
Event loop is closed
CWL conformance tests (ubuntu-22.04, 3.10, v1.2, docker)
Event loop is closed
CWL conformance tests (ubuntu-22.04, 3.10, v1.2, docker)
Event loop is closed
CWL conformance tests (singularity, ubuntu-22.04, 3.13, v1.2, 76bdf9b55e2378432e0e6380ccedebb4a94...
Event loop is closed
CWL conformance tests (ubuntu-22.04, 3.12, v1.1, docker)
Event loop is closed
CWL conformance tests (ubuntu-22.04, 3.11, v1.2, docker)
Event loop is closed
CWL conformance tests (ubuntu-22.04, 3.11, v1.2, docker)
Event loop is closed
CWL conformance tests (ubuntu-22.04, 3.12, v1.2, docker)
Event loop is closed
CWL conformance tests (ubuntu-22.04, 3.12, v1.2, docker)
Event loop is closed
CWL conformance tests (ubuntu-22.04, 3.13, v1.1, docker)
Event loop is closed
CWL conformance tests (ubuntu-22.04, 3.13, v1.2, docker)
Event loop is closed
CWL conformance tests (kubernetes, ubuntu-22.04, 3.13, v1.2, 76bdf9b55e2378432e0e6380ccedebb4a94c...
Event loop is closed
CWL conformance tests (kubernetes, ubuntu-22.04, 3.13, v1.2, 76bdf9b55e2378432e0e6380ccedebb4a94c...
Event loop is closed
CWL conformance tests (ubuntu-22.04, 3.9, v1.1, docker)
Event loop is closed
CWL conformance tests (ubuntu-22.04, 3.9, v1.1, docker)
Event loop is closed
CWL conformance tests (ubuntu-22.04, 3.9, v1.1, docker)
Event loop is closed
CWL conformance tests (ubuntu-22.04, 3.9, v1.1, docker)
Event loop is closed
CWL conformance tests (ubuntu-22.04, 3.9, v1.2, docker)
Event loop is closed
CWL conformance tests (ubuntu-22.04, 3.9, v1.2, docker)
Event loop is closed
StreamFlow unit tests (macos-13, 3.13)
The hosted runner encountered an error while running your job. (Error Type: Disconnect).
CWL conformance tests (macos-13, 3.13, v1.2, 76bdf9b55e2378432e0e6380ccedebb4a94ce483, docker_ent...
Event loop is closed
CWL conformance tests (macos-13, 3.13, v1.2, 76bdf9b55e2378432e0e6380ccedebb4a94ce483, docker_ent...
Event loop is closed
CWL conformance tests (macos-13, 3.13, v1.2, 76bdf9b55e2378432e0e6380ccedebb4a94ce483, docker_ent...
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
CWL conformance tests (macos-13, 3.13, v1.2, 76bdf9b55e2378432e0e6380ccedebb4a94ce483, docker_ent...
Treating docker as a formula. For the cask, use homebrew/cask/docker or specify the `--cask` flag. To silence this message, use the `--formula` flag.
CWL conformance tests (macos-13, 3.13, v1.2, 76bdf9b55e2378432e0e6380ccedebb4a94ce483, docker_ent...
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!

Artifacts

Produced during runtime
Name Size
alpha-unito~streamflow~UNUO4O.dockerbuild
37.3 KB
macos-13-py3.13-cwlv1.2--conformance-tests Expired
40.5 KB
ubuntu-22.04-py3.10-cwlv1.0-docker-conformance-tests Expired
40.9 KB
ubuntu-22.04-py3.10-cwlv1.1-docker-conformance-tests Expired
40.8 KB
ubuntu-22.04-py3.10-cwlv1.2-docker-conformance-tests Expired
40.5 KB
ubuntu-22.04-py3.10-unit-tests Expired
40.9 KB
ubuntu-22.04-py3.11-cwlv1.0-docker-conformance-tests Expired
40.9 KB
ubuntu-22.04-py3.11-cwlv1.1-docker-conformance-tests Expired
40.8 KB
ubuntu-22.04-py3.11-cwlv1.2-docker-conformance-tests Expired
40.5 KB
ubuntu-22.04-py3.11-unit-tests Expired
40.9 KB
ubuntu-22.04-py3.12-cwlv1.0-docker-conformance-tests Expired
40.9 KB
ubuntu-22.04-py3.12-cwlv1.1-docker-conformance-tests Expired
40.8 KB
ubuntu-22.04-py3.12-cwlv1.2-docker-conformance-tests Expired
40.5 KB
ubuntu-22.04-py3.12-unit-tests Expired
40.8 KB
ubuntu-22.04-py3.13-cwlv1.0-docker-conformance-tests Expired
40.9 KB
ubuntu-22.04-py3.13-cwlv1.1-docker-conformance-tests Expired
40.8 KB
ubuntu-22.04-py3.13-cwlv1.2-docker-conformance-tests Expired
40.5 KB
ubuntu-22.04-py3.13-cwlv1.2-kubernetes-conformance-tests Expired
40.4 KB
ubuntu-22.04-py3.13-cwlv1.2-singularity-conformance-tests Expired
40.6 KB
ubuntu-22.04-py3.13-unit-tests Expired
40.8 KB
ubuntu-22.04-py3.9-cwlv1.0-docker-conformance-tests Expired
40.9 KB
ubuntu-22.04-py3.9-cwlv1.1-docker-conformance-tests Expired
40.7 KB
ubuntu-22.04-py3.9-cwlv1.2-docker-conformance-tests Expired
40.4 KB
ubuntu-22.04-py3.9-unit-tests Expired
40.8 KB