Skip to content

Conversation

@LuciferYang
Copy link
Contributor

What changes were proposed in this pull request?

ubuntu-latest no longer includes the runtime environment for R, which has led to the following error in testing:

+++ dirname /home/runner/work/spark-docker/spark-docker/spark/core/../R/install-dev.sh
++ cd /home/runner/work/spark-docker/spark-docker/spark/core/../R
++ pwd
+ FWDIR=/home/runner/work/spark-docker/spark-docker/spark/R
+ LIB_DIR=/home/runner/work/spark-docker/spark-docker/spark/R/lib
+ mkdir -p /home/runner/work/spark-docker/spark-docker/spark/R/lib
+ pushd /home/runner/work/spark-docker/spark-docker/spark/R
+ . /home/runner/work/spark-docker/spark-docker/spark/R/find-r.sh
++ '[' -z '' ']'
++ '[' '!' -z '' ']'
+++ command -v R
++ '[' '!' ']'
++ echo 'Cannot find '\''R_HOME'\''. Please specify '\''R_HOME'\'' or make sure R is properly installed.'
++ exit 1
[error] java.lang.RuntimeException: Nonzero exit value: 1
[error] 	at scala.sys.package$.error(package.scala:30)
[error] 	at scala.sys.process.ProcessBuilderImpl$AbstractBuilder.slurp(ProcessBuilderImpl.scala:138)
[error] 	at scala.sys.process.ProcessBuilderImpl$AbstractBuilder.$bang$bang(ProcessBuilderImpl.scala:108)
[error] 	at SparkR$.$anonfun$settings$124(SparkBuild.scala:1355)
[error] 	at SparkR$.$anonfun$settings$124$adapted(SparkBuild.scala:1352)
[error] 	at scala.Function1.$anonfun$compose$1(Function1.scala:49)
[error] 	at sbt.internal.util.$tilde$greater.$anonfun$$u2219$1(TypeFunctions.scala:63)
[error] 	at sbt.std.Transform$$anon$4.work(Transform.scala:69)
[error] 	at sbt.Execute.$anonfun$submit$2(Execute.scala:283)
[error] 	at sbt.internal.util.ErrorHandling$.wideConvert(ErrorHandling.scala:24)
[error] 	at sbt.Execute.work(Execute.scala:292)
[error] 	at sbt.Execute.$anonfun$submit$1(Execute.scala:283)
[error] 	at sbt.ConcurrentRestrictions$$anon$4.$anonfun$submitValid$1(ConcurrentRestrictions.scala:265)
[error] 	at sbt.CompletionService$$anon$2.call(CompletionService.scala:65)
[error] 	at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
[error] 	at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:515)
[error] 	at java.base/java.util.concurrent.FutureTask.run(FutureTask.java:264)
[error] 	at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
[error] 	at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
[error] 	at java.base/java.lang.Thread.run(Thread.java:829)
[error] (core / buildRPackage) Nonzero exit value: 1
[error] Total time: 12 s, completed Dec 20, 2024, 5:24:08 PM

Error: Process completed with exit code 1.

This pr manually installs r-base to fix the GitHub Actions testing environment. This fix was refer to SPARK-49920

Why are the changes needed?

Install r for ubuntu-latest

Does this PR introduce any user-facing change?

No

How was this patch tested?

CI

@LuciferYang
Copy link
Contributor Author

Merged into master. Thanks @HyukjinKwon

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants