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bb40ef2
Shrinking the buffer up to size of the long type
MaxGekk Mar 10, 2018
177afcc
Fix of sample tests: particular values of sampled dataset must not be…
MaxGekk Mar 11, 2018
738a220
Revert "Fix of sample tests: particular values of sampled dataset mus…
MaxGekk Feb 8, 2019
0d18fcd
Merge remote-tracking branch 'origin/master' into hash-buff-size
MaxGekk Feb 8, 2019
c00b8b8
Fix PairRDDFunctionsSuite
MaxGekk Feb 8, 2019
05ee808
Fix JavaAPISuite
MaxGekk Feb 8, 2019
970fe6c
Fix RandomSuite
MaxGekk Feb 8, 2019
f061151
Fix DataFrameStatSuite
MaxGekk Feb 8, 2019
a05df5c
Fix DatasetSuite
MaxGekk Feb 8, 2019
ef42abe
Fix CSVSuite
MaxGekk Feb 8, 2019
efcc385
Fix JsonSuite
MaxGekk Feb 8, 2019
c2b4a95
Regenerate results of SQLQueryTestSuite
MaxGekk Feb 9, 2019
438b014
Change seed to fix RandomSamplerSuite
MaxGekk Feb 9, 2019
51c2026
Merge remote-tracking branch 'origin/master' into hash-buff-size
MaxGekk Feb 22, 2019
f14b038
Fix numbers in Word2VecSuite
MaxGekk Feb 22, 2019
97395fb
Merge branch 'master' into hash-buff-size
MaxGekk Mar 7, 2019
6640082
Set another seed in org.apache.spark.ml.classification.GBTClassifierS…
MaxGekk Mar 7, 2019
6567b8e
Set another seed in GBTRegressorSuite
MaxGekk Mar 7, 2019
cad048a
Set another seed in KMeansSuite
MaxGekk Mar 7, 2019
5c9fc29
Set another seed in StreamingKMeansSuite
MaxGekk Mar 8, 2019
d3ba437
Merge branch 'hash-buff-size' of github.com:MaxGekk/spark into hash-b…
MaxGekk Mar 8, 2019
7d32804
Regenerate expected results
MaxGekk Mar 8, 2019
bcda3a6
Fix expected values in "binary logistic regression with intercept wit…
MaxGekk Mar 8, 2019
fd5f071
Regenerate reference data for the multinomial logistic regression tests
MaxGekk Mar 12, 2019
a5165b7
Re-generated expected results from R code in LogisticRegressionSuite
MaxGekk Mar 13, 2019
39aa618
Addressing Attila's review comment
MaxGekk Mar 13, 2019
f71a60d
Make Java style checker happy
MaxGekk Mar 13, 2019
661c382
Re-generate reference data for GeneralizedLinearRegressionSuite
MaxGekk Mar 13, 2019
db2443d
Fix PowerIterationClusteringSuite
MaxGekk Mar 13, 2019
229a4e5
Fix reference values in LogisticRegressionSuite
MaxGekk Mar 14, 2019
71fe2dc
Revert "Fix PowerIterationClusteringSuite"
MaxGekk Mar 14, 2019
e9eaa76
Ignore failed tests in PowerIterationClusteringSuite
MaxGekk Mar 14, 2019
39aebd6
fix test_sampleby
MaxGekk Mar 14, 2019
47151b1
fix dataframe and functions tests
MaxGekk Mar 14, 2019
5595b5e
Regen reference data for PySpark ML
MaxGekk Mar 16, 2019
0f3fb32
Changing the seed in mllib/recommendation.py
MaxGekk Mar 16, 2019
7318208
fix SparkR
MaxGekk Mar 16, 2019
a9f5dd4
Make Python style checker happy
MaxGekk Mar 16, 2019
695ff15
regen expected values in tuning.py
MaxGekk Mar 17, 2019
25260c6
Enable tests for PIC
MaxGekk Mar 18, 2019
6e9d2c8
Merge remote-tracking branch 'origin/master' into hash-buff-size
MaxGekk Mar 18, 2019
7de88ea
Assert exact values
MaxGekk Mar 18, 2019
5d6a596
assert(0.0 <= q && q <= 1.0)
MaxGekk Mar 18, 2019
f5728ac
assert(0.0 < q && q < 1.0)
MaxGekk Mar 18, 2019
86892a4
Bump number of iteration up to 60
MaxGekk Mar 21, 2019
efda70c
Bump number of iterations up to 220
MaxGekk Mar 21, 2019
c758f57
Revert r2 to 4.0, and set n1 and n2 to 80
MaxGekk Mar 21, 2019
53faaef
Merge remote-tracking branch 'origin/master' into hash-buff-size
MaxGekk Mar 21, 2019
471841c
Remove spaces
MaxGekk Mar 21, 2019
0622e96
Regen reference values
MaxGekk Mar 21, 2019
3754ede
Revert r2 to 4.0, and set n1 and n2 to 80 in another test
MaxGekk Mar 22, 2019
5774ad6
tol = 0.00001
MaxGekk Mar 22, 2019
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6 changes: 3 additions & 3 deletions R/pkg/tests/fulltests/test_mllib_classification.R
Original file line number Diff line number Diff line change
Expand Up @@ -299,21 +299,21 @@ test_that("spark.mlp", {
df <- read.df(absoluteSparkPath("data/mllib/sample_multiclass_classification_data.txt"),
source = "libsvm")
model <- spark.mlp(df, label ~ features, blockSize = 128, layers = c(4, 5, 4, 3),
solver = "l-bfgs", maxIter = 100, tol = 0.5, stepSize = 1, seed = 1)
solver = "l-bfgs", maxIter = 100, tol = 0.00001, stepSize = 1, seed = 1)

# Test summary method
summary <- summary(model)
expect_equal(summary$numOfInputs, 4)
expect_equal(summary$numOfOutputs, 3)
expect_equal(summary$layers, c(4, 5, 4, 3))
expect_equal(length(summary$weights), 64)
expect_equal(head(summary$weights, 5), list(-0.878743, 0.2154151, -1.16304, -0.6583214, 1.009825),
expect_equal(head(summary$weights, 5), list(-24.28415, 107.8701, 16.86376, 1.103736, 9.244488),
tolerance = 1e-6)

# Test predict method
mlpTestDF <- df
mlpPredictions <- collect(select(predict(model, mlpTestDF), "prediction"))
expect_equal(head(mlpPredictions$prediction, 6), c("0.0", "1.0", "1.0", "1.0", "1.0", "1.0"))
expect_equal(head(mlpPredictions$prediction, 6), c("1.0", "1.0", "1.0", "1.0", "0.0", "1.0"))

# Test model save/load
if (windows_with_hadoop()) {
Expand Down
2 changes: 1 addition & 1 deletion R/pkg/tests/fulltests/test_mllib_clustering.R
Original file line number Diff line number Diff line change
Expand Up @@ -153,7 +153,7 @@ test_that("spark.kmeans", {
model <- spark.kmeans(data = training, ~ ., k = 2, maxIter = 10, initMode = "random")
sample <- take(select(predict(model, training), "prediction"), 1)
expect_equal(typeof(sample$prediction), "integer")
expect_equal(sample$prediction, 1)
expect_equal(sample$prediction, 0)

# Test stats::kmeans is working
statsModel <- kmeans(x = newIris, centers = 2)
Expand Down
4 changes: 2 additions & 2 deletions R/pkg/tests/fulltests/test_mllib_recommendation.R
Original file line number Diff line number Diff line change
Expand Up @@ -27,13 +27,13 @@ test_that("spark.als", {
list(2, 1, 1.0), list(2, 2, 5.0))
df <- createDataFrame(data, c("user", "item", "score"))
model <- spark.als(df, ratingCol = "score", userCol = "user", itemCol = "item",
rank = 10, maxIter = 5, seed = 0, regParam = 0.1)
rank = 10, maxIter = 15, seed = 0, regParam = 0.1)
stats <- summary(model)
expect_equal(stats$rank, 10)
test <- createDataFrame(list(list(0, 2), list(1, 0), list(2, 0)), c("user", "item"))
predictions <- collect(predict(model, test))

expect_equal(predictions$prediction, c(-0.1380762, 2.6258414, -1.5018409),
expect_equal(predictions$prediction, c(0.6324540, 3.6218479, -0.4568263),
tolerance = 1e-4)

# Test model save/load
Expand Down
8 changes: 4 additions & 4 deletions R/pkg/tests/fulltests/test_mllib_tree.R
Original file line number Diff line number Diff line change
Expand Up @@ -148,10 +148,10 @@ test_that("spark.randomForest", {
model <- spark.randomForest(data, Employed ~ ., "regression", maxDepth = 5, maxBins = 16,
numTrees = 20, seed = 123)
predictions <- collect(predict(model, data))
expect_equal(predictions$prediction, c(60.32820, 61.22315, 60.69025, 62.11070,
63.53160, 64.05470, 65.12710, 64.30450,
66.70910, 67.86125, 68.08700, 67.21865,
68.89275, 69.53180, 69.39640, 69.68250),
expect_equal(predictions$prediction, c(60.32495, 61.06495, 60.52120, 61.98500,
63.64450, 64.21910, 65.00810, 64.30450,
66.70910, 67.96875, 68.22140, 67.21865,
68.89275, 69.55900, 69.30160, 69.93050),
tolerance = 1e-4)
stats <- summary(model)
expect_equal(stats$numTrees, 20)
Expand Down
30 changes: 15 additions & 15 deletions R/pkg/tests/fulltests/test_sparkSQL.R
Original file line number Diff line number Diff line change
Expand Up @@ -1786,9 +1786,9 @@ test_that("column binary mathfunctions", {
expect_equal(collect(select(df, shiftRight(df$b, 1)))[4, 1], 4)
expect_equal(collect(select(df, shiftRightUnsigned(df$b, 1)))[4, 1], 4)
expect_equal(class(collect(select(df, rand()))[2, 1]), "numeric")
expect_equal(collect(select(df, rand(1)))[1, 1], 0.134, tolerance = 0.01)
expect_equal(collect(select(df, rand(1)))[1, 1], 0.636, tolerance = 0.01)
expect_equal(class(collect(select(df, randn()))[2, 1]), "numeric")
expect_equal(collect(select(df, randn(1)))[1, 1], -1.03, tolerance = 0.01)
expect_equal(collect(select(df, randn(1)))[1, 1], 1.68, tolerance = 0.01)
})

test_that("string operators", {
Expand Down Expand Up @@ -2360,7 +2360,7 @@ test_that("join(), crossJoin() and merge() on a DataFrame", {
expect_equal(names(joined3), c("age", "name", "name", "test"))
expect_equal(count(joined3), 4)
expect_true(is.na(collect(orderBy(joined3, joined3$age))$age[2]))

joined4 <- join(df, df2, df$name == df2$name, "right_outer")
expect_equal(names(joined4), c("age", "name", "name", "test"))
expect_equal(count(joined4), 4)
Expand All @@ -2377,19 +2377,19 @@ test_that("join(), crossJoin() and merge() on a DataFrame", {
expect_equal(names(joined6), c("newAge", "name", "test"))
expect_equal(count(joined6), 4)
expect_equal(collect(orderBy(joined6, joined6$name))$newAge[3], 24)

joined7 <- select(join(df, df2, df$name == df2$name, "full"),
alias(df$age + 5, "newAge"), df$name, df2$test)
expect_equal(names(joined7), c("newAge", "name", "test"))
expect_equal(count(joined7), 4)
expect_equal(collect(orderBy(joined7, joined7$name))$newAge[3], 24)

joined8 <- select(join(df, df2, df$name == df2$name, "fullouter"),
alias(df$age + 5, "newAge"), df$name, df2$test)
expect_equal(names(joined8), c("newAge", "name", "test"))
expect_equal(count(joined8), 4)
expect_equal(collect(orderBy(joined8, joined8$name))$newAge[3], 24)

joined9 <- select(join(df, df2, df$name == df2$name, "full_outer"),
alias(df$age + 5, "newAge"), df$name, df2$test)
expect_equal(names(joined9), c("newAge", "name", "test"))
Expand All @@ -2400,12 +2400,12 @@ test_that("join(), crossJoin() and merge() on a DataFrame", {
expect_equal(names(joined10), c("age", "name", "name", "test"))
expect_equal(count(joined10), 3)
expect_true(is.na(collect(orderBy(joined10, joined10$age))$age[1]))

joined11 <- join(df, df2, df$name == df2$name, "leftouter")
expect_equal(names(joined11), c("age", "name", "name", "test"))
expect_equal(count(joined11), 3)
expect_true(is.na(collect(orderBy(joined11, joined11$age))$age[1]))

joined12 <- join(df, df2, df$name == df2$name, "left_outer")
expect_equal(names(joined12), c("age", "name", "name", "test"))
expect_equal(count(joined12), 3)
Expand All @@ -2418,23 +2418,23 @@ test_that("join(), crossJoin() and merge() on a DataFrame", {
joined14 <- join(df, df2, df$name == df2$name, "semi")
expect_equal(names(joined14), c("age", "name"))
expect_equal(count(joined14), 3)

joined14 <- join(df, df2, df$name == df2$name, "leftsemi")
expect_equal(names(joined14), c("age", "name"))
expect_equal(count(joined14), 3)

joined15 <- join(df, df2, df$name == df2$name, "left_semi")
expect_equal(names(joined15), c("age", "name"))
expect_equal(count(joined15), 3)

joined16 <- join(df2, df, df2$name == df$name, "anti")
expect_equal(names(joined16), c("name", "test"))
expect_equal(count(joined16), 1)

joined17 <- join(df2, df, df2$name == df$name, "leftanti")
expect_equal(names(joined17), c("name", "test"))
expect_equal(count(joined17), 1)

joined18 <- join(df2, df, df2$name == df$name, "left_anti")
expect_equal(names(joined18), c("name", "test"))
expect_equal(count(joined18), 1)
Expand All @@ -2444,7 +2444,7 @@ test_that("join(), crossJoin() and merge() on a DataFrame", {
"'left', 'leftouter', 'left_outer', 'right', 'rightouter', 'right_outer',",
"'semi', 'leftsemi', 'left_semi', 'anti', 'leftanti' or 'left_anti'.")
expect_error(join(df2, df, df2$name == df$name, "invalid"), error_msg)

merged <- merge(df, df2, by.x = "name", by.y = "name", all.x = TRUE, all.y = TRUE)
expect_equal(count(merged), 4)
expect_equal(names(merged), c("age", "name_x", "name_y", "test"))
Expand Down Expand Up @@ -3026,7 +3026,7 @@ test_that("sampleBy() on a DataFrame", {
sample <- sampleBy(df, "key", fractions, 0)
result <- collect(orderBy(count(groupBy(sample, "key")), "key"))
expect_identical(as.list(result[1, ]), list(key = "0", count = 3))
expect_identical(as.list(result[2, ]), list(key = "1", count = 7))
expect_identical(as.list(result[2, ]), list(key = "1", count = 8))
})

test_that("approxQuantile() on a DataFrame", {
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -59,7 +59,7 @@ private[spark] object XORShiftRandom {

/** Hash seeds to have 0/1 bits throughout. */
private[random] def hashSeed(seed: Long): Long = {
val bytes = ByteBuffer.allocate(java.lang.Long.SIZE).putLong(seed).array()
val bytes = ByteBuffer.allocate(java.lang.Long.BYTES).putLong(seed).array()
val lowBits = MurmurHash3.bytesHash(bytes)
val highBits = MurmurHash3.bytesHash(bytes, lowBits)
(highBits.toLong << 32) | (lowBits.toLong & 0xFFFFFFFFL)
Expand Down
9 changes: 7 additions & 2 deletions core/src/test/java/test/org/apache/spark/JavaAPISuite.java
Original file line number Diff line number Diff line change
Expand Up @@ -32,6 +32,8 @@
import java.util.List;
import java.util.Map;
import java.util.concurrent.*;
import java.util.stream.Collectors;
import java.util.stream.IntStream;

import org.apache.spark.Partitioner;
import org.apache.spark.SparkConf;
Expand Down Expand Up @@ -156,13 +158,16 @@ public void intersection() {

@Test
public void sample() {
List<Integer> ints = Arrays.asList(1, 2, 3, 4, 5, 6, 7, 8, 9, 10);
List<Integer> ints = IntStream.iterate(1, x -> x + 1)
.limit(20)
.boxed()
.collect(Collectors.toList());
JavaRDD<Integer> rdd = sc.parallelize(ints);
// the seeds here are "magic" to make this work out nicely
JavaRDD<Integer> sample20 = rdd.sample(true, 0.2, 8);
assertEquals(2, sample20.count());
JavaRDD<Integer> sample20WithoutReplacement = rdd.sample(false, 0.2, 2);
assertEquals(2, sample20WithoutReplacement.count());
assertEquals(4, sample20WithoutReplacement.count());
}

@Test
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -739,7 +739,7 @@ class PairRDDFunctionsSuite extends SparkFunSuite with SharedSparkContext {
val dist = new BinomialDistribution(trials, p)
val q = dist.cumulativeProbability(actual)
withClue(s"p = $p: trials = $trials") {
assert(q >= 0.001 && q <= 0.999)
assert(0.0 < q && q < 1.0)
}
}
}
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -59,7 +59,7 @@ class RandomSamplerSuite extends SparkFunSuite with Matchers {
// will always fail with some nonzero probability, so I'll fix the seed to prevent these
// tests from generating random failure noise in CI testing, etc.
val rngSeed: Random = RandomSampler.newDefaultRNG
rngSeed.setSeed(235711)
rngSeed.setSeed(235711345678901011L)

// Reference implementation of sampling without replacement (bernoulli)
def sample[T](data: Iterator[T], f: Double): Iterator[T] = {
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -345,7 +345,7 @@ class GBTClassifierSuite extends MLTest with DefaultReadWriteTest {
test("Tests of feature subset strategy") {
val numClasses = 2
val gbt = new GBTClassifier()
.setSeed(123)
.setSeed(42)
.setMaxDepth(3)
.setMaxIter(5)
.setFeatureSubsetStrategy("all")
Expand Down
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