refactor: adds links to github issues of todo notes

lib/configuration/applyConfiguration.js

@@ -10,11 +10,12 @@ const normalizeConfig = require('./normalizeConfig');
 const DEFAULT_CONFIG = {
   http: {},
   endpoint: null,
-  // TODO Find a way to deep merge default and custom configs
-  // while presering prototypes.
-  // When the next line is uncommented, "emitter" property will be processed
-  // during "R.mergeDeepX" call, resulting into EventEmitter's instance prototype
-  // not being copied. This breaks event emitter.
+  /**
+   * @todo https://github.com/apiaryio/dredd/issues/1345
+   * When the next line is uncommented, "emitter" property will be processed
+   * during "R.mergeDeepX" call, resulting into EventEmitter's instance prototype
+   * not being copied. This breaks event emitter.
+   */
   // emitter: new EventEmitter(),
   custom: {
     cwd: process.cwd(),
@@ -50,8 +51,7 @@ const DEFAULT_CONFIG = {
  * Flattens given configuration Object, removing nested "options" key.
  * This makes it possible to use nested "options" key without introducing
  * a breaking change to the library's public API.
- * TODO Remove this method after "options" key is removed in the next
- * major version. Document the removal of "options" in the Dredd docs.
+ * @todo https://github.com/apiaryio/dredd/issues/1344
  */
 function flattenConfig(config) {
   const proxiedConfig = R.compose(

lib/configuration/applyLoggingOptions.js

@@ -11,8 +11,9 @@ function applyLoggingOptions(config) {
     reporterOutputLogger.transports.console.colorize = false;
   }
 
-  // Handling the 'loglevel' value
-  // TODO Can use "applySpec" here to produce next options?
+  /**
+   * @todo https://github.com/apiaryio/dredd/issues/1346
+   */
   if (config.loglevel) {
     const loglevel = config.loglevel.toLowerCase();
     if (loglevel === 'silent') {