Check_spectrum_plottable fix for JWST data in Jy

[kelle]

Check_spectrum_plottable is currently not working for JWST data in Jy for two reasons:

• the flux unit check is failing because Jy cant be converted to erg/s/...
• the tabular-fits reader excludes TELESCOP=JWST.

This PR should fix the flux unit check and provide a work around for the tabular-fits auto-identify.

(Also working with specutils team to address the tabular-fits identify problem. astropy/specutils#1234)

[Copilot]

Pull Request Overview

This PR fixes the issue with check_spectrum_plottable for JWST data in Jy by updating the flux unit check and improving the handling of specutils Spectrum objects. The changes include replacing Spectrum1D with Spectrum along with adding underscored helper functions, parameterizing tests for multiple spectrum files, and updating logging messages.

Reviewed Changes

Copilot reviewed 6 out of 6 changed files in this pull request and generated no comments.

Show a summary per file

File	Description
tests/test_spectra.py	Updated tests to use Spectrum instead of Spectrum1D and parameterized test cases for JWST data.
tests/conftest.py	Added the ignore_ads parameter to the ingest_publication call.
astrodb_utils/utils.py	Changed log level for search messages and refined logging of instrument ingestion.
astrodb_utils/spectra.py	Refactored spectrum checking functions to work with Spectrum; improved flux unit handling.
astrodb_utils/init.py	Updated logger instantiation and initialization messages.

Comments suppressed due to low confidence (1)

astrodb_utils/spectra.py:168

• The xlabel string will not interpolate the variable 'spectrum.spectral_axis.unit' because it lacks an f-string prefix. Consider changing it to an f-string (e.g., f"Dispersion ({spectrum.spectral_axis.unit})") for proper variable substitution.

plt.xlabel("Dispersion ({spectrum.spectral_axis.unit})")

[Copilot]

Pull Request Overview

This PR fixes issues with check_spectrum_plottable for JWST data in Jy by updating flux unit conversions and handling of tabular-fits files. Key changes include:

• Replacing Spectrum1D with Spectrum in tests and core functions.
• Adding parameterized tests to include JWST and WISE data.
• Updating logging messages and refining unit checks.

Reviewed Changes

Copilot reviewed 7 out of 7 changed files in this pull request and generated 1 comment.

Show a summary per file

File	Description
tests/test_spectra.py	Updated tests to use Spectrum, added parameterization for multiple files
tests/conftest.py	Modified call to ingest_publication with an extra ignore_ads argument
pyproject.toml	Updated the specutils dependency version for compatibility
astrodb_utils/utils.py	Adjusted logging level and messaging for instrument ingestion
astrodb_utils/spectra.py	Refactored spectrum check functions and improved docstrings
astrodb_utils/init.py	Revised logger initialization message for clarity

[canavarrete01]

Looks good! I see that you combined check spectrum plottable and check spectrum class and I agree with the reorganization.