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feat: new import commands for dataset and databases (apache#11670)
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* feat: commands for importing databases and datasets

* Refactor code
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betodealmeida authored and auxten committed Nov 20, 2020
1 parent f09feb5 commit 28daf06
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Showing 16 changed files with 983 additions and 7 deletions.
5 changes: 4 additions & 1 deletion superset/cli.py
Original file line number Diff line number Diff line change
Expand Up @@ -304,6 +304,9 @@ def import_datasources(path: str, sync: str, recursive: bool) -> None:
from superset.datasets.commands.importers.v0 import ImportDatasetsCommand

sync_array = sync.split(",")
sync_columns = "columns" in sync_array
sync_metrics = "metrics" in sync_array

path_object = Path(path)
files: List[Path] = []
if path_object.is_file():
Expand All @@ -316,7 +319,7 @@ def import_datasources(path: str, sync: str, recursive: bool) -> None:
files.extend(path_object.rglob("*.yml"))
contents = {path.name: open(path).read() for path in files}
try:
ImportDatasetsCommand(contents, sync_array).run()
ImportDatasetsCommand(contents, sync_columns, sync_metrics).run()
except Exception: # pylint: disable=broad-except
logger.exception("Error when importing dataset")

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23 changes: 23 additions & 0 deletions superset/commands/importers/exceptions.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,23 @@
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not use this file except in compliance
# with the License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing,
# software distributed under the License is distributed on an
# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
# KIND, either express or implied. See the License for the
# specific language governing permissions and limitations
# under the License.

from superset.commands.exceptions import CommandException


class IncorrectVersionError(CommandException):
status = 422
message = "Import has incorrect version"
16 changes: 16 additions & 0 deletions superset/commands/importers/v1/__init__.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,16 @@
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not use this file except in compliance
# with the License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing,
# software distributed under the License is distributed on an
# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
# KIND, either express or implied. See the License for the
# specific language governing permissions and limitations
# under the License.
67 changes: 67 additions & 0 deletions superset/commands/importers/v1/utils.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,67 @@
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not use this file except in compliance
# with the License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing,
# software distributed under the License is distributed on an
# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
# KIND, either express or implied. See the License for the
# specific language governing permissions and limitations
# under the License.

import logging
from typing import Any, Dict

import yaml
from marshmallow import fields, Schema, validate
from marshmallow.exceptions import ValidationError

from superset.commands.importers.exceptions import IncorrectVersionError

METADATA_FILE_NAME = "metadata.yaml"
IMPORT_VERSION = "1.0.0"

logger = logging.getLogger(__name__)


class MetadataSchema(Schema):
version = fields.String(required=True, validate=validate.Equal(IMPORT_VERSION))
type = fields.String(required=True)
timestamp = fields.DateTime()


def load_yaml(file_name: str, content: str) -> Dict[str, Any]:
"""Try to load a YAML file"""
try:
return yaml.safe_load(content)
except yaml.parser.ParserError:
logger.exception("Invalid YAML in %s", METADATA_FILE_NAME)
raise ValidationError({file_name: "Not a valid YAML file"})


def load_metadata(contents: Dict[str, str]) -> Dict[str, str]:
"""Apply validation and load a metadata file"""
if METADATA_FILE_NAME not in contents:
# if the contents ahve no METADATA_FILE_NAME this is probably
# a original export without versioning that should not be
# handled by this command
raise IncorrectVersionError(f"Missing {METADATA_FILE_NAME}")

metadata = load_yaml(METADATA_FILE_NAME, contents[METADATA_FILE_NAME])
try:
MetadataSchema().load(metadata)
except ValidationError as exc:
# if the version doesn't match raise an exception so that the
# dispatcher can try a different command version
if "version" in exc.messages:
raise IncorrectVersionError(exc.messages["version"][0])

# otherwise we raise the validation error
exc.messages = {METADATA_FILE_NAME: exc.messages}
raise exc

return metadata
16 changes: 16 additions & 0 deletions superset/databases/commands/importers/__init__.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,16 @@
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not use this file except in compliance
# with the License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing,
# software distributed under the License is distributed on an
# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
# KIND, either express or implied. See the License for the
# specific language governing permissions and limitations
# under the License.
116 changes: 116 additions & 0 deletions superset/databases/commands/importers/v1/__init__.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,116 @@
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not use this file except in compliance
# with the License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing,
# software distributed under the License is distributed on an
# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
# KIND, either express or implied. See the License for the
# specific language governing permissions and limitations
# under the License.

from typing import Any, Dict, List

from marshmallow import Schema, validate
from marshmallow.exceptions import ValidationError
from sqlalchemy.orm import Session

from superset import db
from superset.commands.base import BaseCommand
from superset.commands.exceptions import CommandInvalidError
from superset.commands.importers.v1.utils import (
load_metadata,
load_yaml,
METADATA_FILE_NAME,
)
from superset.databases.commands.importers.v1.utils import import_database
from superset.databases.schemas import ImportV1DatabaseSchema
from superset.datasets.commands.importers.v1.utils import import_dataset
from superset.datasets.schemas import ImportV1DatasetSchema
from superset.models.core import Database

schemas: Dict[str, Schema] = {
"databases/": ImportV1DatabaseSchema(),
"datasets/": ImportV1DatasetSchema(),
}


class ImportDatabasesCommand(BaseCommand):

"""Import databases"""

# pylint: disable=unused-argument
def __init__(self, contents: Dict[str, str], *args: Any, **kwargs: Any):
self.contents = contents
self._configs: Dict[str, Any] = {}

def _import_bundle(self, session: Session) -> None:
# first import databases
database_ids: Dict[str, int] = {}
for file_name, config in self._configs.items():
if file_name.startswith("databases/"):
database = import_database(session, config, overwrite=True)
database_ids[str(database.uuid)] = database.id

# import related datasets
for file_name, config in self._configs.items():
if (
file_name.startswith("datasets/")
and config["database_uuid"] in database_ids
):
config["database_id"] = database_ids[config["database_uuid"]]
# overwrite=False prevents deleting any non-imported columns/metrics
import_dataset(session, config, overwrite=False)

def run(self) -> None:
self.validate()

# rollback to prevent partial imports
try:
self._import_bundle(db.session)
db.session.commit()
except Exception as exc:
db.session.rollback()
raise exc

def validate(self) -> None:
exceptions: List[ValidationError] = []

# verify that the metadata file is present and valid
try:
metadata = load_metadata(self.contents)
except ValidationError as exc:
exceptions.append(exc)
metadata = None

for file_name, content in self.contents.items():
prefix = file_name.split("/")[0]
schema = schemas.get(f"{prefix}/")
if schema:
try:
config = load_yaml(file_name, content)
schema.load(config)
self._configs[file_name] = config
except ValidationError as exc:
exc.messages = {file_name: exc.messages}
exceptions.append(exc)

# validate that the type declared in METADATA_FILE_NAME is correct
if metadata:
type_validator = validate.Equal(Database.__name__)
try:
type_validator(metadata["type"])
except ValidationError as exc:
exc.messages = {METADATA_FILE_NAME: {"type": exc.messages}}
exceptions.append(exc)

if exceptions:
exception = CommandInvalidError("Error importing database")
exception.add_list(exceptions)
raise exception
42 changes: 42 additions & 0 deletions superset/databases/commands/importers/v1/utils.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,42 @@
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "License"); you may not use this file except in compliance
# with the License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing,
# software distributed under the License is distributed on an
# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
# KIND, either express or implied. See the License for the
# specific language governing permissions and limitations
# under the License.

import json
from typing import Any, Dict

from sqlalchemy.orm import Session

from superset.models.core import Database


def import_database(
session: Session, config: Dict[str, Any], overwrite: bool = False
) -> Database:
existing = session.query(Database).filter_by(uuid=config["uuid"]).first()
if existing:
if not overwrite:
return existing
config["id"] = existing.id

# TODO (betodealmeida): move this logic to import_from_dict
config["extra"] = json.dumps(config["extra"])

database = Database.import_from_dict(session, config, recursive=False)
if database.id is None:
session.flush()

return database
21 changes: 21 additions & 0 deletions superset/databases/schemas.py
Original file line number Diff line number Diff line change
Expand Up @@ -408,3 +408,24 @@ class DatabaseRelatedDashboards(Schema):
class DatabaseRelatedObjectsResponse(Schema):
charts = fields.Nested(DatabaseRelatedCharts)
dashboards = fields.Nested(DatabaseRelatedDashboards)


class ImportV1DatabaseExtraSchema(Schema):
metadata_params = fields.Dict(keys=fields.Str(), values=fields.Raw())
engine_params = fields.Dict(keys=fields.Str(), values=fields.Raw())
metadata_cache_timeout = fields.Dict(keys=fields.Str(), values=fields.Integer())
schemas_allowed_for_csv_upload = fields.List(fields.String)


class ImportV1DatabaseSchema(Schema):
database_name = fields.String(required=True)
sqlalchemy_uri = fields.String(required=True)
cache_timeout = fields.Integer(allow_none=True)
expose_in_sqllab = fields.Boolean()
allow_run_async = fields.Boolean()
allow_ctas = fields.Boolean()
allow_cvas = fields.Boolean()
allow_csv_upload = fields.Boolean()
extra = fields.Nested(ImportV1DatabaseExtraSchema)
uuid = fields.UUID(required=True)
version = fields.String(required=True)
14 changes: 12 additions & 2 deletions superset/datasets/commands/importers/v0.py
Original file line number Diff line number Diff line change
Expand Up @@ -282,9 +282,19 @@ class ImportDatasetsCommand(BaseCommand):
in Superset.
"""

def __init__(self, contents: Dict[str, str], sync: Optional[List[str]] = None):
def __init__(
self,
contents: Dict[str, str],
sync_columns: bool = False,
sync_metrics: bool = False,
):
self.contents = contents
self.sync = sync

self.sync = []
if sync_columns:
self.sync.append("columns")
if sync_metrics:
self.sync.append("metrics")

def run(self) -> None:
self.validate()
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