DNA

Applications written in python as part of the class problem sets.

Table of content

• General info
• Setup
• Technologies

General info

DNA sequence "analyzer" program written in python. The aim of the application is to find so-called STRs (Short Tandem Repeats) in a given DNA code. The program reads in the sequence then it searches for the longest occurence of given STRs. The it cross-checks if the result is matching with any "suspect" that can be found in the database.

Setup

The application can be run locally or using the IDE after logging in with your GitHub account.

To run the program:

1. You need to have Python installed or using the CS50 IDE
2. To run: $ python dna.py
3. Usage: python dna.py data.csv sequence.txt  

Technologies

   Libraries:

• csv
• sys
• panda
•