updated readme in user scripts

bailey-lab · Jan 16, 2024 · ded8e51 · ded8e51
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diff --git a/user_scripts/README.md b/user_scripts/README.md
@@ -1,5 +1,7 @@
 The user can run pipelines by editing the yaml files in this directory and then running the corresponding shell script by opening a terminal, navigating to this directory, then entering the command below
 
+**Note that the variant_calling.sh and the check_run_stats.sh are both run from the variant_calling.yaml file**
+
 ```
 bash <run_script.sh>
 ```