>python tcga_cnv_2_ga4gh.py [path of data directiory] [path of meta-file]
>python openCNV_2_ga4gh.py
- a directiory which has the TCGA data in the orginal folder & file structure.
- a JSON file downloaded through the TCGA API, which contains the meta-info of each file
python tcga_cnv_2_ga4gh.py /Volumes/originalData/TCGA/MaskedCNV_2017_10_03 /Volumes/originalData/TCGA/Meta/tcga_masked_cnv_meta_171205.json