A small python script to import cellranger analysis into Scanpy. It loads scRNA-Seq experiment out of cellranger, includes the count matrices, the UMAP+T-SNE reduction, the clustering, and normalized RNA count matrix.
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A small python script to import cellranger analysis into Scapy. It loads scRNA-Seq experiment out of cellranger, includes the count matrices, the UMAP+T-SNE reduction, the clustering, and normalized RNA count matrix.
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becavin-lab/cellranger-to-scanpy
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A small python script to import cellranger analysis into Scapy. It loads scRNA-Seq experiment out of cellranger, includes the count matrices, the UMAP+T-SNE reduction, the clustering, and normalized RNA count matrix.
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