[polymake] preliminary builder for x86_64 linux and mac os

L/libpolymake_julia/build_tarballs.jl

@@ -4,7 +4,7 @@ using BinaryBuilder
 import Pkg: PackageSpec
 
 const name = "libpolymake_julia"
-const version = v"0.0.3"
+const version = v"0.0.4"
 
 # Collection of sources required to build libpolymake_julia
 const sources = [

P/polymake/build_tarballs.jl

@@ -0,0 +1,143 @@
+# Note that this script can accept some limited command-line arguments, run
+# `julia build_tarballs.jl --help` to see a usage message.
+using BinaryBuilder, Pkg
+
+name = "polymake"
+version = v"4.1.3"
+
+# Collection of sources required to build polymake
+sources = [
+    GitSource("https://github.com/polymake/polymake.git", "8704ebbba9f8cc2b07f824a283ffed49a8c036be")
+    DirectorySource("./bundled")
+]
+
+# Bash recipe for building across all platforms
+script = raw"""
+cd $WORKSPACE/srcdir/polymake
+
+perl_version=5.30.3
+
+mkdir -p ${prefix}/deps
+for dir in Perl boost GMP MPFR cddlib lrslib bliss PPL FLINT normaliz; do
+   ln -s .. ${prefix}/deps/${dir}_jll
+done
+
+atomic_patch -p1 ../patches/relocatable.patch
+if [[ $target == *darwin* ]]; then
+  # we cannot run configure and instead provide config files
+  mkdir -p build/Opt
+  mkdir -p build/perlx/$perl_version/apple-darwin14
+  cp ../config/config-$target.ninja build/config.ninja
+  cp ../config/build-Opt-$target.ninja build/Opt/build.ninja
+  cp ../config/targets.ninja build/targets.ninja
+  ln -s ../config.ninja build/Opt/config.ninja
+  cp ../config/perlx-config-$target.ninja build/perlx/$perl_version/apple-darwin14/config.ninja
+  # for a modified pure perl JSON module and to make miniperl find the correct modules
+  export PERL5LIB=$prefix/lib/perl5/$perl_version:$prefix/lib/perl5/$perl_version/darwin-2level:$WORKSPACE/srcdir/patches
+  atomic_patch -p1 ../patches/polymake-cross.patch
+  atomic_patch -p1 ../patches/polymake-cross-build.patch
+else
+  ./configure CFLAGS="-Wno-error" CC="$CC" CXX="$CXX" \
+              PERL=${prefix}/deps/Perl_jll/bin/perl LDFLAGS="$LDFLAGS" \
+              --prefix=${prefix} \
+              --with-boost=${prefix}/deps/boost_jll \
+              --with-gmp=${prefix}/deps/GMP_jll \
+              --with-mpfr=${prefix}/deps/MPFR_jll \
+              --with-cdd=${prefix}/deps/cddlib_jll \
+              --with-lrs=${prefix}/deps/lrslib_jll \
+              --with-bliss=${prefix}/deps/bliss_jll \
+              --with-ppl=${prefix}/deps/PPL_jll \
+              --with-flint=${prefix}/deps/FLINT_jll \
+              --with-libnormaliz=${prefix}/deps/normaliz_jll \
+              --without-singular \
+              --without-native
+fi
+
+ninja -v -C build/Opt -j8
+# $(( nproc / 2 ))
+
+ninja -v -C build/Opt install
+
+# undo patch needed for building
+if [[ $target == *darwin* ]]; then
+  atomic_patch -R -p1 ../patches/polymake-cross-build.patch
+fi
+install -m 444 -D support/*.pl $prefix/share/polymake/support/
+
+# replace miniperl
+sed -i -e "s/miniperl-for-build/perl/" ${libdir}/polymake/config.ninja ${bindir}/polymake*
+# replace binary path with env
+sed -i -e "s#$bindir/perl#/usr/bin/env perl#g" ${libdir}/polymake/config.ninja ${bindir}/polymake*
+# remove target and sysroot
+sed -i -e "s#--sysroot[ =]\S\+##g" ${libdir}/polymake/config.ninja
+sed -i -e "s#-target[ =]\S\+##g" ${libdir}/polymake/config.ninja
+
+sed -e "s#${prefix}#\${prefix}#g" ${libdir}/polymake/config.ninja > ${libdir}/polymake/config-reloc.ninja
+
+# cleanup
+rm -rf ${prefix}/deps
+
+install_license COPYING
+"""
+
+# These are the platforms we will build for by default, unless further
+# platforms are passed in on the command line
+platforms = [
+ MacOS(:x86_64, compiler_abi=CompilerABI(cxxstring_abi=:cxx11)),
+ Linux(:x86_64, libc=:glibc, compiler_abi=CompilerABI(cxxstring_abi=:cxx11)),
+]
+
+# The products that we will ensure are always built
+products = [
+    LibraryProduct("libpolymake", :libpolymake; dont_dlopen=true)
+    LibraryProduct("libpolymake-apps-rt", :libpolymake_apps_rt; dont_dlopen=true)
+    ExecutableProduct("polymake", :polymake)
+    ExecutableProduct("polymake-config", Symbol("polymake_config"))
+]
+
+# Dependencies that must be installed before this package can be built
+dependencies = [
+    Dependency(PackageSpec(name="Perl_jll", uuid="83958c19-0796-5285-893e-a1267f8ec499", version=v"5.30.3"))
+    Dependency("GMP_jll")
+    Dependency("MPFR_jll")
+    Dependency("boost_jll")
+    Dependency("CompilerSupportLibraries_jll")
+    Dependency("lrslib_jll")
+    Dependency("PPL_jll")
+    Dependency("cddlib_jll")
+    Dependency("bliss_jll")
+    Dependency(PackageSpec(name="FLINT_jll", uuid="e134572f-a0d5-539d-bddf-3cad8db41a82",version=v"2.6.0"))
+    Dependency("normaliz_jll")
+]
+
+# Build the tarballs, and possibly a `build.jl` as well.
+build_tarballs(ARGS, name, version, sources, script, platforms, products, dependencies; preferred_gcc_version=v"7", init_block="""
+
+   mutable_artifacts_toml = joinpath(dirname(@__DIR__), "MutableArtifacts.toml")
+   polymake_tree = "polymake_tree"
+   polymake_tree_hash = artifact_hash(polymake_tree, mutable_artifacts_toml)
+   if polymake_tree_hash != nothing
+      unbind_artifact!(mutable_artifacts_toml,polymake_tree)
+   end
+
+   # create a partial polymake tree with links to dependencies
+   polymake_tree_hash = create_artifact() do art_dir
+      mkpath(joinpath(art_dir,"deps"))
+      # maybe we need more?
+      for dep in [GMP_jll, MPFR_jll, FLINT_jll, boost_jll, lrslib_jll, cddlib_jll, normaliz_jll, bliss_jll, Perl_jll, PPL_jll]
+         symlink(dep.artifact_dir, joinpath(art_dir,"deps","\$dep"))
+      end
+      for dir in readdir(polymake_jll.artifact_dir)
+         symlink(joinpath(polymake_jll.artifact_dir,dir), joinpath(art_dir,dir))
+      end
+   end
+   bind_artifact!(mutable_artifacts_toml,
+      polymake_tree,
+      polymake_tree_hash;
+      force=true
+   )
+
+   # Point polymake to our custom tree
+   ENV["POLYMAKE_DEPS_TREE"] = artifact_path(polymake_tree_hash)
+""")
+

P/polymake/bundled/config/build-Opt-x86_64-apple-darwin14.ninja

@@ -0,0 +1,18 @@
+builddir=/workspace/srcdir/polymake/build
+buildmode=Opt
+buildtop=${builddir}/${buildmode}
+config.file=${builddir}/config.ninja
+include ${config.file}
+perlxpath=perlx/5.30.3/apple-darwin14
+include ${builddir}/${perlxpath}/config.ninja
+include ${root}/support/rules.ninja
+CmodeFLAGS=${COptFLAGS}
+CexternModeFLAGS=${CexternOptFLAGS}
+CmodeCACHE=${COptCACHE}
+LDmodeFLAGS=${LDOptFLAGS}
+
+include ${builddir}/targets.ninja
+
+# should rerun the target generation if any of the included files changes
+build build.ninja: phony | ${config.file} ${builddir}/targets.ninja
+

P/polymake/bundled/config/config-x86_64-apple-darwin14.ninja

@@ -0,0 +1,66 @@
+# last configured with:
+configure.command=/workspace/srcdir/polymake/configure CXX=clang++ --with-libcxx --with-lrs-include=/workspace/destdir/include/lrslib
+root=/workspace/srcdir/polymake
+core.includes=-I${root}/include/core-wrappers -I${root}/include/core
+app.includes=-I${root}/include/app-wrappers -I${root}/include/apps -I${root}/include/external/permlib -I${root}/include/external/TOSimplex
+
+CC = clang -target x86_64-apple-darwin14 --sysroot /opt/x86_64-apple-darwin14/x86_64-apple-darwin14/sys-root
+CXX = clang++ -target x86_64-apple-darwin14 --sysroot /opt/x86_64-apple-darwin14/x86_64-apple-darwin14/sys-root
+CFLAGS = -mmacosx-version-min=10.8 -I/workspace/destdir/deps/GMP_jll/include -I/workspace/destdir/deps/MPFR_jll/include
+CXXFLAGS = -stdlib=libc++ -std=c++14 -mmacosx-version-min=10.8 -I/workspace/destdir/deps/GMP_jll/include -I/workspace/destdir/deps/MPFR_jll/include -I/workspace/destdir/deps/boost_jll/include -I/workspace/destdir/deps/FLINT_jll/include -DPOLYMAKE_WITH_FLINT
+ARCHFLAGS = 
+CsharedFLAGS = -fPIC -pipe
+CXXOPT = -O3
+CXXDEBUG = -g
+CXXCOV = --coverage -O1
+CXXSANITIZE = -fno-omit-frame-pointer -O1 -g
+CflagsSuppressWarnings = 
+CLANGversion = 4.0
+CPPStd = 201402
+XcodeVersion = 9.1.0
+LDFLAGS = -mmacosx-version-min=10.8 -L/workspace/destdir/deps/GMP_jll/lib -Wl,-rpath,/workspace/destdir/deps/GMP_jll/lib -L/workspace/destdir/deps/MPFR_jll/lib -Wl,-rpath,/workspace/destdir/deps/MPFR_jll/lib -L/workspace/destdir/deps/FLINT_jll/lib -Wl,-rpath,/workspace/destdir/deps/FLINT_jll/lib -stdlib=libc++
+LDsharedFLAGS = -mmacosx-version-min=10.8 -L/workspace/destdir/lib -Wl,-rpath,/workspace/destdir/lib -dynamiclib -undefined dynamic_lookup -fstack-protector-strong
+LDcallableFLAGS = -mmacosx-version-min=10.8  -L/workspace/destdir/lib -Wl,-rpath,/workspace/destdir/lib -dynamiclib -undefined dynamic_lookup -fstack-protector-strong  -mmacosx-version-min=10.8 -fstack-protector-strong
+LDsonameFLAGS = -install_name /workspace/destdir/lib/
+LIBS =  -lc++ -lflint -lmpfr -lgmp -lpthread
+ExternalHeaders =  permlib TOSimplex
+Arch = darwin.x86_64
+BundledExts = cdd atint bliss flint libnormaliz lrs ppl sympol
+BuildModes = Opt Debug
+InstallTop = /workspace/destdir/share/polymake
+InstallArch = /workspace/destdir/lib/polymake
+InstallBin = /workspace/destdir/bin
+InstallInc = /workspace/destdir/include
+InstallLib = /workspace/destdir/lib
+InstallDoc = /workspace/destdir/share/polymake/doc
+AR = ar
+GMP.version = 6.1.2
+MPFR.version = 4.0.2
+bundled.atint.RequireExtensions=cdd
+bundled.bliss.CXXFLAGS = -I/workspace/destdir/deps/bliss_jll/include
+bundled.bliss.LDFLAGS = -L/workspace/destdir/deps/bliss_jll/lib -Wl,-rpath,/workspace/destdir/deps/bliss_jll/lib
+bundled.bliss.LIBS = -lbliss
+bundled.bliss.RequireExtensions=
+bundled.cdd.UseBundled = 0
+bundled.cdd.CFLAGS = -I/workspace/destdir/deps/cddlib_jll/include/cddlib
+bundled.cdd.LDFLAGS = -L/workspace/destdir/deps/cddlib_jll/lib -Wl,-rpath,/workspace/destdir/deps/cddlib_jll/lib
+bundled.cdd.LIBS = -lcddgmp
+bundled.cdd.RequireExtensions=
+bundled.flint.RequireExtensions=
+bundled.libnormaliz.UseBundled = 0
+bundled.libnormaliz.CXXFLAGS = -I/workspace/destdir/deps/normaliz_jll/include
+bundled.libnormaliz.LDFLAGS = -L/workspace/destdir/deps/normaliz_jll/lib -Wl,-rpath,/workspace/destdir/deps/normaliz_jll/lib
+bundled.libnormaliz.LIBS = -lnormaliz  -lflint -lgmpxx
+bundled.libnormaliz.RequireExtensions=
+bundled.lrs.UseBundled = 0
+bundled.lrs.CFLAGS =  -DHAVE_LRSDRIVER -I/workspace/destdir/deps/lrslib_jll/include/lrslib
+bundled.lrs.LDFLAGS = -L/workspace/destdir/deps/lrslib_jll/lib -Wl,-rpath,/workspace/destdir/deps/lrslib_jll/lib
+bundled.lrs.LIBS = -llrs
+bundled.lrs.RequireExtensions=
+bundled.ppl.CXXFLAGS = -I/workspace/destdir/deps/PPL_jll/include -Wno-class-memaccess
+bundled.ppl.LDFLAGS = -L/workspace/destdir/deps/PPL_jll/lib -Wl,-rpath,/workspace/destdir/deps/PPL_jll/lib
+bundled.ppl.LIBS = -lppl
+bundled.ppl.RequireExtensions=
+bundled.sympol.UseBundled = 1
+bundled.sympol.CXXFLAGS = -I${root}/bundled/sympol/external/sympol -DPOLYMAKE_WITH_PPL
+bundled.sympol.RequireExtensions=lrs cdd ppl

P/polymake/bundled/config/perlx-config-x86_64-apple-darwin14.ninja

@@ -0,0 +1,5 @@
+PERL=/workspace/destdir/deps/Perl_jll/bin/miniperl-for-build
+CXXglueFLAGS=-I/workspace/destdir/deps/Perl_jll/lib/perl5/5.30.3/darwin-2level/CORE -fno-common -DPERL_DARWIN -mmacosx-version-min=10.8 -fno-strict-aliasing -pipe -fstack-protector-strong -DPERL_USE_SAFE_PUTENV -I/workspace/destdir/deps/Perl_jll/include -DPerlVersion=5303 -Wno-nonnull
+LIBperlFLAGS=-L/workspace/destdir/deps/Perl_jll/lib/perl5/5.30.3/darwin-2level/CORE -lperl
+ExtUtils_xsubpp=/workspace/destdir/deps/Perl_jll/lib/perl5/5.30.3/ExtUtils/xsubpp
+ExtUtils_typemap=/workspace/destdir/deps/Perl_jll/lib/perl5/5.30.3/ExtUtils/typemap

P/polymake/bundled/config/targets.ninja

@@ -0,0 +1,2 @@
+build all: phony
+build install: phony