Integration Tests #99
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name: Integration Tests | |
on: | |
pull_request: | |
workflow_dispatch: | |
schedule: | |
- cron: "0 4 * * *" | |
push: | |
tags: | |
- "*" | |
branches: | |
- main | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.ref }} | |
cancel-in-progress: true | |
env: | |
ALLOW_PLOTTING: true | |
SHELLOPTS: 'errexit:pipefail' | |
jobs: | |
# For now this is just MNE-Python, but others could be added | |
mne: | |
name: MNE-Python | |
runs-on: ubuntu-22.04 | |
env: | |
DISPLAY: ':99.0' | |
MNE_LOGGING_LEVEL: 'info' | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: '3.10' | |
- run: git clone --depth=1 https://github.com/mne-tools/mne-python.git --branch main --single-branch | |
- run: ./mne-python/tools/setup_xvfb.sh | |
- name: Install MNE dependencies | |
run: pip install numpy scipy matplotlib nibabel PyQt6!=6.6.1 PyQt6-Qt6!=6.6.1 qtpy ipympl pytest pytest-cov pytest-harvest pytest-timeout sphinx-gallery nbformat nbclient imageio imageio-ffmpeg | |
- name: Install PyVista | |
run: pip install -ve . # pyvista | |
- name: Install PyVistaQt main | |
run: pip install -v git+https://github.com/pyvista/pyvistaqt.git | |
- name: Install MNE | |
run: pip install -ve . # mne | |
working-directory: mne-python | |
- name: MNE Info | |
run: mne sys_info -p | |
working-directory: mne-python | |
- run: ./tools/get_testing_version.sh | |
working-directory: mne-python | |
- uses: actions/cache@v3 | |
with: | |
key: ${{ env.TESTING_VERSION }} | |
path: ~/mne_data | |
- run: ./tools/github_actions_download.sh | |
working-directory: mne-python | |
- run: pytest mne/viz/_brain mne/viz/tests/test_3d.py mne/viz/backends | |
working-directory: mne-python | |
pyvistaqt: | |
name: PyVistaQt | |
runs-on: ubuntu-22.04 | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: '3.10' | |
- run: git clone https://github.com/pyvista/pyvistaqt.git --single-branch | |
- uses: pyvista/setup-headless-display-action@main | |
with: | |
qt: true | |
pyvista: false | |
- run: pip install -ve ./pyvistaqt -r ./pyvistaqt/requirements_test.txt PyQt6!=6.6.1 PyQt6-Qt6!=6.6.1 | |
- run: pip install -ve . | |
- run: pytest ./tests | |
working-directory: pyvistaqt | |
geovista: | |
name: GeoVista | |
runs-on: ubuntu-22.04 | |
defaults: | |
run: | |
shell: bash -l {0} | |
env: | |
CARTOPY_FEATURE: 'https://raw.githubusercontent.com/SciTools/cartopy/main/tools/cartopy_feature_download.py' | |
CARTOPY_SHARE_DIR: ~/.local/share/cartopy | |
GEOVISTA_POOCH_MUTE: true | |
steps: | |
- uses: awalsh128/cache-apt-pkgs-action@v1.1.3 | |
with: | |
packages: libgl1-mesa-glx xvfb | |
version: 3.0 | |
- uses: actions/checkout@v4 | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: '3.10' | |
- run: git clone https://github.com/bjlittle/geovista.git --single-branch | |
- name: Install PyVista | |
run: pip install -ve . # pyvista | |
- name: Install GeoVista | |
run: pip install -ve .[test,exam,cmap] # geovista | |
working-directory: geovista | |
- name: Download cartopy assets | |
run: | | |
wget --quiet ${CARTOPY_FEATURE} | |
mkdir -p ${CARTOPY_SHARE_DIR} | |
python cartopy_feature_download.py physical --output ${CARTOPY_SHARE_DIR} --no-warn | |
- run: pytest | |
working-directory: geovista |