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  1. CellProfiler/CellProfiler CellProfiler/CellProfiler Public

    An open-source application for biological image analysis

    Python 913 376

  2. CellProfiler/CellProfiler-Analyst CellProfiler/CellProfiler-Analyst Public

    Open-source software for exploring and analyzing large, high-dimensional image-derived data.

    Python 145 72

  3. CellProfiler/CellProfiler-plugins CellProfiler/CellProfiler-plugins Public

    Community-contributed and experimental CellProfiler modules.

    Python 57 67

  4. DistributedScience/Distributed-CellProfiler DistributedScience/Distributed-CellProfiler Public

    Run encapsulated docker containers with CellProfiler in the Amazon Web Services infrastructure.

    Python 39 25

  5. CellProfiler/tutorials CellProfiler/tutorials Public

    CellProfiler tutorial pipelines and images

    Jupyter Notebook 82 86

  6. broadinstitute/imaging-platform-pipelines broadinstitute/imaging-platform-pipelines Public

    Cell Painting and other pipelines from the Imaging Platform

    14 13