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Merge remote-tracking branch 'origin/bep-016' into bvec_reference_axes
Conflicts: src/derivatives/05-diffusion-derivatives.md
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,130 @@ | ||
| --- | ||
| name: GitHub_Changelog_Generator | ||
|
|
||
| on: | ||
| push: | ||
| branches: ["master"] | ||
|
|
||
| concurrency: | ||
| group: ${{ github.workflow }}-${{ github.ref }} | ||
| cancel-in-progress: true | ||
|
|
||
| jobs: | ||
| github_changelog_generator: | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - uses: actions/checkout@v4 | ||
| - name: Set up Ruby | ||
| uses: ruby/setup-ruby@v1 | ||
| with: | ||
| ruby-version: '3.2' | ||
| - name: Install dependencies | ||
| run: | | ||
| gem install github_changelog_generator | ||
| - name: Check version | ||
| run: | | ||
| github_changelog_generator --version | ||
| - name: Build changelog | ||
| run: | | ||
| mkdir ~/changelog_build | ||
| github_changelog_generator \ | ||
| --exclude-tags-regex "^(?!v).*?$" \ | ||
| --user bids-standard \ | ||
| --project bids-specification \ | ||
| --token ${{ secrets.GITHUB_TOKEN }} \ | ||
| --output ~/changelog_build/CHANGES.md \ | ||
| --header-label "# Changelog" \ | ||
| --release-branch master \ | ||
| --no-issues \ | ||
| --no-filter-by-milestone \ | ||
| --no-compare-link \ | ||
| --pr-label "" \ | ||
| --enhancement-label "" \ | ||
| --bugs-label "" \ | ||
| --exclude-labels "exclude-from-changelog" | ||
| - name: Append changelog from pre-GitHub times | ||
| run: | | ||
| cat ${{ github.workspace }}/src/pregh-changes.md >> ~/changelog_build/CHANGES.md | ||
| - name: Remove the inserted advert from the file | ||
| run: | | ||
| sed -i '/This Changelog was automatically generated by/d' ~/changelog_build/CHANGES.md | ||
| - name: Print out complete changelog | ||
| run: | | ||
| cat ~/changelog_build/CHANGES.md | ||
| - name: Archive changelog | ||
| uses: actions/upload-artifact@v4 | ||
| with: | ||
| name: changelog_pre_lint | ||
| path: | | ||
| ~/changelog_build/CHANGES.md | ||
| lint_generated_changelog: | ||
| needs: github_changelog_generator | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - uses: actions/checkout@v4 | ||
| - name: Download previously build changelog | ||
| uses: actions/download-artifact@v4 | ||
| with: | ||
| name: changelog_pre_lint | ||
| path: ~/changelog_build | ||
| - name: Set up Node | ||
| uses: actions/setup-node@v4 | ||
| with: | ||
| node-version: 20 | ||
| - name: Install remark and extensions | ||
| run: | | ||
| npm install `cat npm-requirements.txt` | ||
| - name: Remark on autogenerated CHANGES.md | ||
| # first remove empty lines | ||
| # then run remark to re-organize | ||
| # replace remark's bullet list "*" with "-" | ||
| # final run of remark to check everything passes now | ||
| run: | | ||
| head -n 25 ~/changelog_build/CHANGES.md | ||
| sed -i '/^$/d' ~/changelog_build/CHANGES.md | ||
| echo $'\n------------------------------\n' | ||
| head -n 25 ~/changelog_build/CHANGES.md | ||
| npx remark ~/changelog_build/CHANGES.md --rc-path ${{ github.workspace }}/.remarkrc --output ~/changelog_build/CHANGES.md --quiet | ||
| echo $'\n------------------------------\n' | ||
| head -n 25 ~/changelog_build/CHANGES.md | ||
| sed -i 's/^* /- /' ~/changelog_build/CHANGES.md | ||
| echo $'\n------------------------------\n' | ||
| head -n 25 ~/changelog_build/CHANGES.md | ||
| npx remark ~/changelog_build/CHANGES.md --rc-path ${{ github.workspace }}/.remarkrc --frail --quiet --no-stdout | ||
| - name: Archive linted changelog | ||
| uses: actions/upload-artifact@v4 | ||
| with: | ||
| name: changelog_post_lint | ||
| path: | | ||
| ~/changelog_build/CHANGES.md | ||
| commit_generated_changelog: | ||
| permissions: | ||
| # Give the default GITHUB_TOKEN write permission to commit and push the | ||
| # added or changed files to the repository. | ||
| contents: write | ||
| needs: lint_generated_changelog | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - uses: actions/checkout@v4 | ||
| - name: Download previously build changelog | ||
| uses: actions/download-artifact@v4 | ||
| with: | ||
| name: changelog_post_lint | ||
| path: ~/changelog_build | ||
| - name: Changelog deployment | ||
| run: | | ||
| if (git log -1 --pretty=%s | grep Merge*) && (! git log -1 --pretty=%b | grep REL:) ; then | ||
| mv ~/changelog_build/CHANGES.md ${{ github.workspace }}/src/CHANGES.md | ||
| merge_message=$(git log -1 | grep Merge | grep "pull") | ||
| PR_number=$(echo $merge_message | cut -d ' ' -f 4) | ||
| git config credential.helper 'cache --timeout=120' | ||
| git config user.email "bids.maintenance@gmail.com" | ||
| git config user.name "bids-maintenance" | ||
| git add ${{ github.workspace }}/src/CHANGES.md | ||
| git commit -m "[DOC] Auto-generate changelog entry for PR ${PR_number}" | ||
| git push https://${{ secrets.GITHUB_TOKEN }}@github.com/bids-standard/bids-specification.git master | ||
| else | ||
| echo "Did not detect a "Merge commit" to master, or detected a Release ... doing nothing." | ||
| fi |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,26 @@ | ||
| --- | ||
| name: Shellcheck | ||
|
|
||
| on: | ||
| push: | ||
| branches: [master] | ||
| pull_request: | ||
| branches: [master] | ||
|
|
||
| permissions: | ||
| contents: read | ||
|
|
||
| jobs: | ||
| shellcheck: | ||
| name: Check shell scripts | ||
| runs-on: ubuntu-latest | ||
|
|
||
| steps: | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| - name: Install dependencies | ||
| run: | | ||
| sudo apt update && sudo apt install -y shellcheck | ||
| - name: shellcheck | ||
| run: | | ||
| git grep -l '^#\( *shellcheck \|!\(/bin/\|/usr/bin/env \)\(sh\|bash\|dash\|ksh\)\)' | xargs shellcheck |
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