[DOC] make BIDS example website redirect to main BIDS website #1183
Workflow file for this run
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name: validate_datasets | |
on: | |
push: | |
branches: ['**'] | |
pull_request: | |
branches: ['**'] | |
create: | |
branches: [master] | |
tags: ['**'] | |
schedule: | |
- cron: "0 4 * * 1" | |
concurrency: | |
group: ${{ github.ref }} | |
cancel-in-progress: true | |
jobs: | |
build: | |
strategy: | |
fail-fast: false | |
matrix: | |
platform: [ubuntu-latest, macos-latest, windows-latest] | |
bids-validator: [stable, main, dev, legacy] | |
runs-on: ${{ matrix.platform }} | |
env: | |
TZ: Europe/Berlin | |
FORCE_COLOR: 1 | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Node.js | |
if: matrix.bids-validator == 'legacy' | |
uses: actions/setup-node@v4 | |
with: | |
node-version: 18 | |
- uses: denoland/setup-deno@v2 | |
if: matrix.bids-validator != 'legacy' | |
with: | |
deno-version: v2.x | |
- name: Install BIDS validator (stable) | |
if: matrix.bids-validator == 'stable' | |
run: | | |
deno install -Agf -n bids-validator jsr:@bids/validator | |
shell: bash | |
- name: Install BIDS validator (main) | |
if: matrix.bids-validator == 'main' | |
run: | | |
# If unmerged validator PRs are needed for testing, you can use | |
# https://github.com/<FORK>/bids-validator/raw/<BRANCH>/bids-validator/src/bids-validator.ts | |
deno install -Agf https://github.com/bids-standard/bids-validator/raw/deno-build/bids-validator.js | |
shell: bash | |
- name: Install BIDS validator (dev) | |
if: matrix.bids-validator == 'dev' | |
run: | | |
git clone -b dev https://github.com/bids-standard/bids-validator/ ../bids-validator | |
cd ../bids-validator | |
deno compile -A -o $HOME/.deno/bin/bids-validator src/bids-validator.ts | |
shell: bash | |
- name: Install BIDS validator (legacy) | |
if: "matrix.bids-validator == 'legacy'" | |
run: | | |
npm install -g bids-validator | |
- name: Display versions and environment information | |
run: | | |
echo $TZ | |
date | |
which deno && echo "deno\n----" && deno --version || true | |
echo "node\n----"; node --version | |
echo "npm\n----"; npm --version | |
echo "bids-validator"; bids-validator --version | |
shell: bash | |
- name: Check that no large files are present | |
if: "matrix.bids-validator == 'stable'" | |
run: | | |
echo "Checking for big files ..." | |
found=`find . -not -path "./.git*" -type f -size +500k` | |
if [ "$found" == "" ] | |
then | |
echo "No big files present, great!" | |
else | |
echo "Found big files:" | |
echo "$found" | |
exit 1; | |
fi | |
shell: bash | |
- name: Skip legacy validation for post-legacy datasets | |
run: for DS in mrs_* dwi_deriv; do touch $DS/.SKIP_VALIDATION; done | |
if: matrix.bids-validator == 'legacy' | |
shell: bash | |
- name: Skip stable validation for datasets with unreleased features | |
run: for DS in dwi_deriv; do touch $DS/.SKIP_VALIDATION; done | |
if: matrix.bids-validator != 'dev' | |
shell: bash | |
- name: Set BIDS_SCHEMA variable for dev version | |
if: matrix.bids-validator == 'dev' | |
# When proposing new features, schema changes may be necessary. | |
# Update this URL to the schema.json from PRs to the spec, when needed. | |
# If this variable is unset, dev will generally track the latest development | |
# release of https://jsr.io/@bids/schema | |
run: echo BIDS_SCHEMA=https://bids-specification.readthedocs.io/en/latest/schema.json >> $GITHUB_ENV | |
- name: Validate all BIDS datasets using bids-validator | |
run: | | |
cat ./run_tests.sh | |
./run_tests.sh | |
shell: bash |