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[ENH] BEP 020 Eye Tracking #1128

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[ENH] BEP 020 Eye Tracking #1128

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Commits on Oct 1, 2021

  1. create branch bep020

    @chloepasturel
    chloepasturel committed Oct 1, 2021
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  2. Add datatype metadata and suffixes for eye tracking

    @chloepasturel
    chloepasturel committed Oct 1, 2021
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Commits on Nov 29, 2021

  1. bep020 md

    @greckla
    greckla committed Nov 29, 2021
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  2. Update 10-eye-tracking.md

    @greckla
    greckla authored Nov 29, 2021
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  3. minor update md

    @greckla
    greckla committed Nov 29, 2021
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  4. minor updates md 2

    @greckla
    greckla committed Nov 29, 2021
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Commits on Dec 1, 2021

  1. final changes and working version with mkdocs

    mszinte committed Dec 1, 2021
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  2. add forgotten example

    mszinte committed Dec 1, 2021
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  3. final changes

    mszinte committed Dec 1, 2021
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Commits on Jun 15, 2022

  1. latest changes

    mszinte committed Jun 15, 2022
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Commits on Jun 16, 2022

  1. Update 10-eye-tracking.md 

    correction of text
    @mszinte
    mszinte authored Jun 16, 2022
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Commits on Nov 12, 2022

  1. Apply suggestions from code review

    @Remi-Gau
    Remi-Gau authored Nov 12, 2022
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  2. Merge branch 'master' into bep020

    @Remi-Gau
    Remi-Gau committed Nov 12, 2022
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  3. fix bad latin

    @Remi-Gau
    Remi-Gau committed Nov 12, 2022
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  4. md lint

    @Remi-Gau
    Remi-Gau committed Nov 12, 2022
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  5. fix yml

    @Remi-Gau
    Remi-Gau committed Nov 12, 2022
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  6. md lint

    @Remi-Gau
    Remi-Gau committed Nov 12, 2022
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  7. lint yml

    @Remi-Gau
    Remi-Gau committed Nov 12, 2022
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  8. add semantic line breaks

    @Remi-Gau
    Remi-Gau committed Nov 12, 2022
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  9. move suffix

    @Remi-Gau
    Remi-Gau committed Nov 12, 2022
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  10. rm CogPOID and CogAtlas yml

    @Remi-Gau
    Remi-Gau committed Nov 12, 2022
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  11. move some metadata

    @Remi-Gau
    Remi-Gau committed Nov 12, 2022
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  12. move more metadata

    @Remi-Gau
    Remi-Gau committed Nov 12, 2022
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  13. move more metadata

    @Remi-Gau
    Remi-Gau committed Nov 12, 2022
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  14. rely on task.yml for events

    @Remi-Gau
    Remi-Gau committed Nov 12, 2022
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  15. change extension to tsv

    @Remi-Gau
    Remi-Gau committed Nov 12, 2022
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  16. fix schema

    @Remi-Gau
    Remi-Gau committed Nov 12, 2022
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  17. fix links

    @Remi-Gau
    Remi-Gau committed Nov 12, 2022
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  18. fix typos

    @Remi-Gau
    Remi-Gau committed Nov 12, 2022
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  19. fix link

    @Remi-Gau
    Remi-Gau committed Nov 12, 2022
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Commits on Dec 5, 2022

  1. most of the change but mkserve not working yet

    mszinte committed Dec 5, 2022
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Commits on Dec 6, 2022

  1. some more change still not working

    mszinte committed Dec 6, 2022
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  2. change in mkdocs.yml based on commments

    mszinte committed Dec 6, 2022
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  3. run pre-commit and fix yml

    @Remi-Gau
    Remi-Gau committed Dec 6, 2022
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  4. Merge branch 'master' into bep020

    @Remi-Gau
    Remi-Gau authored Dec 6, 2022
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  5. add eyetrack modality object

    @Remi-Gau
    Remi-Gau committed Dec 6, 2022
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  6. format markdown

    @Remi-Gau
    Remi-Gau committed Dec 6, 2022
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  7. format markdown

    @Remi-Gau
    Remi-Gau committed Dec 6, 2022
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Commits on Dec 7, 2022

  1. space missing in tabular_data/eyetrack.yaml

    mszinte committed Dec 7, 2022
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  2. merging

    mszinte committed Dec 7, 2022
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  3. fixing conflict for real

    mszinte committed Dec 7, 2022
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  4. automatic changes by pre-commit

    mszinte committed Dec 7, 2022
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  5. instru

    mszinte committed Dec 7, 2022
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  6. pre-commit stuff

    mszinte committed Dec 7, 2022
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  7. correct error of manipulation of logo.eps

    mszinte committed Dec 7, 2022
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  8. some test

    mszinte committed Dec 7, 2022
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  9. some test

    mszinte committed Dec 7, 2022
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  10. some test

    mszinte committed Dec 7, 2022
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  11. some test

    mszinte committed Dec 7, 2022
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  12. changes of columns names

    mszinte committed Dec 7, 2022
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Commits on Dec 8, 2022

  1. Update src/modality-specific-files/eye-tracking.md 

    Co-authored-by: Taylor Salo <tsalo90@gmail.com>
    @mszinte @tsalo
    mszinte and tsalo authored Dec 8, 2022
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  2. change in metadata

    mszinte committed Dec 8, 2022
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  3. Merge branch 'bep020' of https://github.com/mszinte/bids-specification … 

    …into bep020
    mszinte committed Dec 8, 2022
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  4. test new changes with pre-commit

    mszinte committed Dec 8, 2022
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  5. correct error in eyetrack.md

    mszinte committed Dec 8, 2022
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  6. add RecordTimeStart and RecordTimeEnd

    mszinte committed Dec 8, 2022
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  7. cahnge eye_sample to eye_timestamp

    mszinte committed Dec 8, 2022
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  8. correct error example json

    mszinte committed Dec 8, 2022
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  9. error in datasets links

    mszinte committed Dec 8, 2022
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  10. last round of review on main doc

    mszinte committed Dec 8, 2022
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  11. slight modif of SAOI

    mszinte committed Dec 8, 2022
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  12. slight modif of main md

    mszinte committed Dec 8, 2022
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  13. correction of space

    mszinte committed Dec 8, 2022
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  14. try without modality

    mszinte committed Dec 8, 2022
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  15. Update src/modality-specific-files/eye-tracking.md 

    Co-authored-by: Yaroslav Halchenko <debian@onerussian.com>
    @mszinte @yarikoptic
    mszinte and yarikoptic authored Dec 8, 2022
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  16. put back mkdocs.yaml with unsorted modality specific files

    mszinte committed Dec 8, 2022
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  17. Update src/modality-specific-files/eye-tracking.md 

    Co-authored-by: Taylor Salo <tsalo90@gmail.com>
    @mszinte @tsalo
    mszinte and tsalo authored Dec 8, 2022
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  18. Update src/schema/objects/metadata.yaml 

    Co-authored-by: Taylor Salo <tsalo90@gmail.com>
    @mszinte @tsalo
    mszinte and tsalo authored Dec 8, 2022
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  19. Update src/schema/objects/metadata.yaml 

    Co-authored-by: Taylor Salo <tsalo90@gmail.com>
    @mszinte @tsalo
    mszinte and tsalo authored Dec 8, 2022
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  20. Update src/schema/objects/metadata.yaml 

    Co-authored-by: Taylor Salo <tsalo90@gmail.com>
    @mszinte @tsalo
    mszinte and tsalo authored Dec 8, 2022
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  21. change after review of tsalo

    mszinte committed Dec 8, 2022
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  22. Merge branch 'bep020' of https://github.com/mszinte/bids-specification … 

    …into bep020
    mszinte committed Dec 8, 2022
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  23. put back /tool/filetree_exampl.ipynb

    mszinte committed Dec 8, 2022
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  24. instru

    mszinte committed Dec 8, 2022
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  25. change on metadata based on tsalo comments

    mszinte committed Dec 8, 2022
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Commits on Dec 16, 2022

  1. change to desambiguate the columns in case of two eyes recording

    mszinte committed Dec 16, 2022
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  2. change to account for the BEP020

    mszinte committed Dec 16, 2022
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  3. change of json example in reply to https://github.com/bids-standard/b… 

    …ids-specification/pull/1128/files/9f223a1488ed1ac844f1bfd63ffd93af696102fd#r1047302456
    mszinte committed Dec 16, 2022
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  4. change RecordTimeStart and RecordTimeEnd to StartTime_eyetrack (with … 

    …same name as StartTime physio) and StopTime_eyetrack
    mszinte committed Dec 16, 2022
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  5. take out Scree settings from metadata as they were put in the main br… 

    …anch of bids specification
    mszinte committed Dec 16, 2022
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  6. Merge branch 'master' into bep020

    @mszinte
    mszinte authored Dec 16, 2022
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  7. insist on calibration in the text

    mszinte committed Dec 16, 2022
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  8. add eyetrack suffix to timeseries suffixes in task.yaml in order to a… 

    …dd eyetrack files to other modality automatically by macros
    mszinte committed Dec 16, 2022
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  9. point 2 on suggestion bids-standard#1128 (comment)

    mszinte committed Dec 16, 2022
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Commits on Dec 24, 2022

  1. Merge remote-tracking branch 'upstream/master' into bep020

    @Remi-Gau
    Remi-Gau committed Dec 24, 2022
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  2. fix markdown

    @Remi-Gau
    Remi-Gau committed Dec 24, 2022
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  3. fix markdown

    @Remi-Gau
    Remi-Gau committed Dec 24, 2022
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Commits on Apr 5, 2023

  1. Merge branch 'master' into bep020

    @Remi-Gau
    Remi-Gau authored Apr 5, 2023
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  2. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
    @pre-commit-ci
    pre-commit-ci[bot] committed Apr 5, 2023
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Commits on May 23, 2023

  1. Merge branch 'master' into bep020

    @Remi-Gau
    Remi-Gau authored May 23, 2023
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Commits on Jun 6, 2023

  1. Merge branch 'master' into bep020

    @Remi-Gau
    Remi-Gau authored Jun 6, 2023
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Commits on Jun 12, 2023

  1. Merge remote-tracking branch 'upstream/master' into bep20

    @Remi-Gau
    Remi-Gau committed Jun 12, 2023
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  2. codespell fixes

    @Remi-Gau
    Remi-Gau committed Jun 12, 2023
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  3. schema fix

    @Remi-Gau
    Remi-Gau committed Jun 12, 2023
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Commits on Jun 28, 2023

  1. change to follow recommandations of https://doi.org/10.3758/s13428-02… 

    …1-01762-8
    Martin Szinte committed Jun 28, 2023
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  2. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
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  3. Merge branch 'master' into bep020

    @Remi-Gau
    Remi-Gau authored Jun 28, 2023
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Commits on Jun 29, 2023

  1. split metadata

    @Remi-Gau
    Remi-Gau committed Jun 29, 2023
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  2. fix metadata

    @Remi-Gau
    Remi-Gau committed Jun 29, 2023
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  3. format

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    Remi-Gau committed Jun 29, 2023
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Commits on Jul 3, 2023

  1. fix typo

    @Remi-Gau
    Remi-Gau committed Jul 3, 2023
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  2. update example

    @Remi-Gau
    Remi-Gau committed Jul 3, 2023
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  3. make gunzip optional

    @Remi-Gau
    Remi-Gau committed Jul 3, 2023
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Commits on Jul 4, 2023

  1. Merge branch 'master' into bep020

    @Remi-Gau
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Commits on Jul 5, 2023

  1. add required events.json metadata

    @Remi-Gau
    Remi-Gau committed Jul 5, 2023
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Commits on Jul 6, 2023

  1. fix list

    @Remi-Gau
    Remi-Gau committed Jul 6, 2023
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  2. fix list

    @Remi-Gau
    Remi-Gau committed Jul 6, 2023
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Commits on Sep 7, 2023

  1. Merge branch 'master' into bep020

    @Remi-Gau
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Commits on Oct 5, 2023

  1. Update eye-tracking.md 

    Change link to new version of resting state dataset on openneuro
    @mszinte
    mszinte authored Oct 5, 2023
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  2. Changes for metadata 

    - change DataType from number to array of arrays for AverageCalibrationError and MaximalCalibrationError
- delete CalibrationList from metadata.yaml and eyetrack.yaml as it only contains dublicates of other metadata and thus not needed
- fix typo in metadata.yaml: CalibrationCount was wrongly named "CalibrationType" so CalibrationType was listed twice
    @julia-pfarr
    julia-pfarr committed Oct 5, 2023
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  3. Merge pull request #1 from julia-pfarr/julia 

    Changes for metadata
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Commits on Oct 26, 2023

  1. Merge pull request #5 from julia-pfarr/bep020 

    Modifications in metadata for eyetrack.json
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  2. change unit of ScreenSize in example events.json

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Commits on Nov 9, 2023

  1. Merge pull request #6 from julia-pfarr/bep020 

    change unit of ScreenSize in example events.json
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Commits on Nov 20, 2023

  1. Update src/modality-specific-files/eye-tracking.md 

    Co-authored-by: Arshitha Basavaraj <arsh2794@proton.me>
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    Remi-Gau and Arshitha authored Nov 20, 2023
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Commits on Nov 28, 2023

  1. Apply suggestions from code review 

    Co-authored-by: Oscar Esteban <code@oscaresteban.es>
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  2. Update src/schema/objects/columns.yaml 

    Co-authored-by: Oscar Esteban <code@oscaresteban.es>
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  3. Update src/schema/objects/columns.yaml 

    Co-authored-by: Oscar Esteban <code@oscaresteban.es>
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Commits on Nov 30, 2023

  1. Update metadata.yaml 

    Attempt to fix the type of AverageCalibrationError and MaximalCalibrationError, leaving empty the number of maxItems as it is possible to have as many calibration as desired
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  2. Merge branch 'master' into bep020

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  3. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  4. Update src/schema/objects/metadata.yaml

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  5. fix issues in mkdocs.yml

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  6. hasty copy paste

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  7. fix time stamp

    @Remi-Gau
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  8. add placeholder for eventual publication

    @sappelhoff
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  9. Update metadata.yaml 

    Add description for two eyes.
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  10. Update src/modality-specific-files/eye-tracking.md 

    Co-authored-by: Oscar Esteban <code@oscaresteban.es>
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Commits on Dec 7, 2023

  1. Update src/modality-specific-files/eye-tracking.md 

    Co-authored-by: Oscar Esteban <code@oscaresteban.es>
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Commits on Feb 29, 2024

  1. Update src/modality-specific-files/near-infrared-spectroscopy.md 

    Co-authored-by: Oscar Esteban <code@oscaresteban.es>
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  2. enh: a proposal for the new RecordingType (-> PhysioType) idea

    @oesteban
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  3. enh: add eyetracking examples

    @oesteban
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  4. enh: revise metadata specifications

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  5. fix: remove duplicated metadata entry

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  6. restore eyetrack sidecars

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  7. Merge pull request #8 from oesteban/bep020-proposal 

    ENH: A proposal for the new ``RecordingType`` (-> ``PhysioType``) idea
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  9. fix: pacify codespell

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  10. fix: pacify markdown linter

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  11. fix: attempt to get line numbers on tsv files

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  12. fix: attempt 2 to get line numbers on tsv files

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Commits on Mar 1, 2024

  1. Update src/modality-specific-files/eye-tracking.md

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  2. fix: address several issues, add example datasets, pacify remark

    @oesteban
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  3. enh: better ordering, clearer definitions

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  4. sty: pacify remark

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  5. enh: change zero-based to one-base indexes, more consistent with BIDS

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  6. fix: remove redirected URL

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  7. Merge branch 'master' into bep020

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  8. enh: add columns definition for physioevents and improve eyetracker e… 

    …xamples
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  10. fix: length of new message column description

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  11. fix: improved definition of ForeignIndexColumn

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Commits on Mar 2, 2024

  1. Merge branch 'master' into bep020

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  2. enh: clearly state specific physio types at the outset

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  3. enh: improving and adding example file trees

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  4. fix: normalize file tree macros and repare syntax of some

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  5. fix: typos and readability improvements

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Commits on Mar 21, 2024

  1. review and slight text modification

    Martin Szinte committed Mar 21, 2024
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  2. Merge branch 'master' into bep020

    @Remi-Gau
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  3. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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Commits on Mar 22, 2024

  1. Merge remote-tracking branch 'upstream/master' into bep020

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  2. fix: revert boilerplate about publication

    @oesteban
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  3. enh: drop "old" eyetrack

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  4. fix: "cyclopean" value for RecordedEye metadata

    @oesteban
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  5. fix: deduplicate example datasets, and move eyetrack's ones into an a… 

    …dmonition at the beginning of its section
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  6. fix: missing setting eyetrack tabular data allowed to add columns

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Commits on Mar 24, 2024

  1. enh: deep reorganization of the section

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  2. fix: pacify linter

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Commits on Mar 25, 2024

  1. Update src/modality-specific-files/physiological-and-other-continuous… 

    …-recordings.md

Co-authored-by: Remi Gau <remi_gau@hotmail.com>
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    oesteban and Remi-Gau authored Mar 25, 2024
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  2. enh: move escalating events' metadata to REQUIRED into task data section

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Commits on Apr 11, 2024

  1. Merge remote-tracking branch 'upstream/master' into bep020

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Commits on May 29, 2024

  1. Merge branch 'master' into bep020

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Commits on Jul 28, 2024

  1. fix unit

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  2. use levels to describe metadata

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  3. Merge remote-tracking branch 'upstream/master' into pr/mszinte/1128

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  4. fix typo

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  5. minor schema fix

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Commits on Sep 5, 2024

  1. Merge branch 'master' into bep020

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  2. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  3. fix

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Commits on Oct 3, 2024

  1. enh: add @Sourav-Kulkarni's suggestions about eye-tracker/screen dist… 

    …ance
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  2. [pre-commit.ci] auto fixes from pre-commit.com hooks 

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  3. enh: address @qian-chu's review comment about documenting timestamp

    @oesteban
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  4. enh: address @Remi-Gau's comment on column order

    @oesteban
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