FIX: Permit electrodes.tsv in meg directories #1747
Workflow file for this run
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name: Python tests | |
on: | |
push: | |
branches: [master] | |
pull_request: | |
branches: [master] | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.ref }} | |
cancel-in-progress: true | |
jobs: | |
build: | |
strategy: | |
fail-fast: false | |
matrix: | |
platform: [ubuntu-latest, macos-latest, windows-latest] | |
python-version: ['3.8', '3.9', '3.10', '3.11'] | |
runs-on: ${{ matrix.platform }} | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set git name/email | |
run: | | |
git config --global user.email "bids.maintenance@gmail.com" | |
git config --global user.name "bids-maintenance" | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: conda-incubator/setup-miniconda@v2 | |
with: | |
auto-update-conda: true | |
python-version: ${{ matrix.python-version }} | |
- name: Install git-annex ubuntu | |
if: matrix.platform == 'ubuntu-latest' | |
shell: bash -l {0} | |
run: conda install -c conda-forge git-annex | |
- name: Install git-annex macos | |
if: matrix.platform == 'macos-latest' | |
shell: bash -l {0} | |
run: brew install git-annex | |
- name: Install git-annex windows | |
if: matrix.platform == 'windows-latest' | |
uses: crazy-max/ghaction-chocolatey@v2 | |
with: | |
args: install git-annex --yes --ignore-checksums | |
- name: Install remaining dependencies | |
shell: bash -l {0} | |
run: | | |
which python | |
pip install datalad | |
pip install pytest pytest-sugar flake8 pydocstyle | |
pip install -e ./bids-validator | |
- name: Check formatting | |
shell: bash -l {0} | |
run: | | |
cd bids-validator | |
flake8 bids_validator | |
pydocstyle bids_validator/bids_validator.py | |
- name: Test with pytest | |
shell: bash -l {0} | |
run: | | |
cd bids-validator | |
pytest --doctest-modules bids_validator --verbose |