Merge pull request #4 from daichengxin/dev

update ms2rescore
bigbio · Jan 14, 2025 · 2354924 · 2354924
2 parents 7ba82b7 + b8da650
commit 2354924
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/modules/local/ms2rescore/main.nf b/modules/local/ms2rescore/main.nf
@@ -45,7 +45,7 @@ process MS2RESCORE {
     """
     rescoring ms2rescore \\
         --psm_file $idxml \\
-        --spectrum_path . \\
+        --spectrum_path $mzml \\
         --ms2_tolerance $ms2_tolerence \\
         --output_path ${idxml.baseName}_ms2rescore.idXML \\
         --ms2pip_model_dir ${params.ms2pip_model_dir} \\