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Building from adam-core module directory fails to generate Scala code for sql package #2047

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heuermh opened this issue Sep 11, 2018 · 0 comments
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@heuermh
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heuermh commented Sep 11, 2018

adam-core master
$ mvn clean compile
...
[INFO]
[INFO] --- build-helper-maven-plugin:1.12:add-source (add-source) @ adam-core-spark2_2.11 ---
[INFO] Source directory: adam/adam-core/src/main/scala added.
[INFO] Source directory: adam/adam-core/target/generated-sources/src/main/scala added.
[INFO]
[INFO] --- exec-maven-plugin:1.5.0:java (generate-scala-products) @ adam-core-spark2_2.11 ---
[INFO]
[INFO] --- exec-maven-plugin:1.5.0:java (generate-scala-projection-fields) @ adam-core-spark2_2.11 ---
[INFO]
...
[INFO] --- scala-maven-plugin:3.2.2:compile (scala-compile-first) @ adam-core-spark2_2.11 ---
...
[ERROR] adam/adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantRDD.scala:42: error: object Variant is not a member of package org.bdgenomics.adam.sql
[ERROR] import org.bdgenomics.adam.sql.{ Variant => VariantProduct }
[ERROR]        ^
...

adam-core master
$ cd ..

adam master
$ mvn clean compile
...
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
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