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Create a simplified vocabulary for naming projections. #419

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tdanford opened this issue Oct 14, 2014 · 2 comments
Closed

Create a simplified vocabulary for naming projections. #419

tdanford opened this issue Oct 14, 2014 · 2 comments

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@tdanford
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Creating Projection objects is actually somewhat annoying -- especially for AlignmentRecord. We should create "standard projections" for commonly-used schemas, which are named and described in an appropriate way, that can be used and combined rather than simply creating a new custom projection for every use of a Parquet file.

E.g. is there a projection for when you only need the names and metadata about reads? for when you need the full alignment? For when you do (or don't) care about the mate- (or paired-end-) fields?

@tdanford tdanford changed the title Create a simplified 'vocabulary' for creating Projections Create a simplified vocabulary for naming projections. Oct 14, 2014
@calvertj
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Happy to help here, ping me timothy and we can have a quick chat.

@fnothaft
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fnothaft commented Jul 6, 2016

Closing unless we have a concrete proposal.

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