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Add "gVCF" filter #121

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fnothaft opened this issue Nov 2, 2014 · 0 comments · Fixed by #123
Closed

Add "gVCF" filter #121

fnothaft opened this issue Nov 2, 2014 · 0 comments · Fixed by #123
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fnothaft commented Nov 2, 2014

Currently, we emit genotype records for all observed sites (i.e., a gVCF style record). In case we don't want this, we should have a filter which filters out "reference" calls.
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Cleanup biallelic genotyper output fnothaft/avocado
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