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Remove plot-bamstats #288

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holtgrewe opened this issue Dec 22, 2022 · 0 comments · Fixed by #290
Closed

Remove plot-bamstats #288

holtgrewe opened this issue Dec 22, 2022 · 0 comments · Fixed by #290

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@holtgrewe
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Describe the bug
On our HPC, plot-bamstats hangs. I assume this is because of file system access into the conda environment's var sub directory.

To Reproduce
N/A

Expected behavior
It should run through.

Additional context
We should remove that step completely as the result is rarely used anyway.
holtgrewe added a commit that referenced this issue Dec 22, 2022
@holtgrewe
feature: remove plot-bamstats (#288)
d405736
@holtgrewe holtgrewe linked a pull request Dec 22, 2022 that will close this issue
feat: remove plot-bamstats (#288) #290
Merged
holtgrewe added a commit that referenced this issue Dec 22, 2022
@holtgrewe
feat: remove plot-bamstats (#288)
cc3b196
holtgrewe added a commit that referenced this issue Dec 22, 2022
@holtgrewe
feature: remove plot-bamstats (#288)
495e9fd
holtgrewe added a commit that referenced this issue Dec 22, 2022
@holtgrewe
feat: remove plot-bamstats (#288) (#290)
125b601
@tedil tedil mentioned this issue Jun 28, 2024
Merged
This was referenced Dec 9, 2024
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Closed
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feat: remove plot-bamstats (#288) bihealth/snappy-pipeline
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@holtgrewe