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Error when using bwa with the mbcs ngs mapping meta-tool #518

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ericblanc20 opened this issue Jun 10, 2024 · 0 comments · Fixed by #520
Closed

Error when using bwa with the mbcs ngs mapping meta-tool #518

ericblanc20 opened this issue Jun 10, 2024 · 0 comments · Fixed by #520
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Describe the bug
bwa is missing from the environment of the mbs/somatic meta-tool (used by the ngs_mapping step).

Additional context
The meta-tool (& more generally the ngs_mapping step) needs to be completely revisited.
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