Code

feat!: 237 revive cnvkit#339

Code

Merged

ericblanc20 merged 10 commits intomainbihealth/snappy-pipeline:mainfrom 237-revive-cnvkitbihealth/snappy-pipeline:237-revive-cnvkitCopy head branch name to clipboardJan 23, 2023

+2,945-854

Commits

Commits on Jan 17, 2023

• feat!: 237 revive cnvkit #339

  ericblanc20

  committed
  20ecf58

• Added list of samples, symlink to access file, access, target & antitarget in output, fixed typos

  ericblanc20

  committed
  b9ddd92

• Discard autobin for hybrid method, add sex & metrics

  ericblanc20

  committed
  8f6b5ff

• Fix wrapper logs

  ericblanc20

  committed
  2338243

• After panel_of_normals successful test on Becnel dataset

  ericblanc20

  committed
  c301054

• Access separate from cnvkit

  ericblanc20

  committed
  adc2bed

• Changes to panel of normals

  ericblanc20

  committed
  1511006

• Updated CNVkit usage for exome & wgs

  ericblanc20

  committed
  405d5e7

• Make snakefmt happy

  ericblanc20

  committed
  f7c14f9

Commits on Jan 20, 2023

• fix: tbi to vcf_tbi in tests to conform to new convention

  ericblanc20

  committed
  cae427d