Skip to content

Issues: bihealth/vcfpy

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

13 Open 42 Closed
13 Open 42 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

ContigHeaderLine.length as int
#180 opened Oct 23, 2024 by schorlton-bugseq
Swap encoding to utf-8
#179 opened Sep 4, 2024 by famosab
A sample column value of 0|0 is not being parsed correctly
#176 opened Jun 24, 2024 by JarvisVon
1
Fix parse record error verbiage
#175 opened Jun 24, 2024 by JarvisVon
1
The equal sign is not escaped in output
#171 opened Feb 22, 2024 by ericblanc20
1
Does add_format function work with multisample vcf file ?
#157 opened Sep 7, 2023 by giacuong171
1
vcfpy writer.write_record write string with "comma (,)" into "%2C"
#156 opened Jun 28, 2023 by marissa97
Record.fetch opens and closes TabixFile on each call, which slows down fetch calls drastically
#155 opened May 19, 2023 by fday
in _serialize_record row = [record.CHROM, record.POS] AttributeError: 'str' object has no attribute 'CHROM'
#153 opened Jan 18, 2023 by ShadiKhoury
Suggestion: Add process_alt() to __init__.py and documentation
#152 opened Dec 29, 2022 by luederm
Escape characters
#144 opened May 12, 2021 by Akazhiel
Pysam UnicodeDecodeError when loading with tabixed VCF
#139 opened Sep 14, 2020 by dgomezpere
5
Help subsetting samples
#134 opened Sep 17, 2019 by oyhel
2
ProTip! no:milestone will show everything without a milestone.