Update Cloudspades (#51456)

* add cloudspades

* Rename recipes/spades/cloudspades/meta.yaml to recipes/cloudspades/meta.yaml

* rm flags, better versioning, rm arm

* rm aarch

* fix build

* add ignore exports, link to the license file directly

* fix constraint

* fix license path

* simplify tests b/c cloudspades acts different

* skip osk. make life easier

* add proper test

* add gz

* try building with less threads

* fix tests

* edit test command

* do not build on aarch64/arm64

* add case for Darwin

* edit case

* Add "-D_LIBCPP_DISABLE_AVAILABILITY" for OSX

* skip osx x86_64 for now

* simplify build script, move things manually, add real test

* fix mv command

* bump build number

* rm the mv statement, it's redundant

* rm the test?

* rm arm

---------

Co-authored-by: mencian <joshua.zhuang@yahoo.com>
Co-authored-by: Joshua Zhuang <71105179+mencian@users.noreply.github.com>
Co-authored-by: Martin Grigorov <martin-g@users.noreply.github.com>

recipes/cloudspades/build.sh

@@ -2,10 +2,10 @@
 
 set -e -o pipefail -x
 
-export LIBRARY_PATH="${PREFIX}/lib"
-export INCLUDE_PATH="${PREFIX}/include"
-export CFLAGS="${CFLAGS} -O3 -fcommon"
-export CXXFLAGS="${CFLAGS} -O3 -fcommon -I${PREFIX}/include -D_LIBCPP_DISABLE_AVAILABILITY -fsigned-char"
+#export LIBRARY_PATH="${PREFIX}/lib"
+#export INCLUDE_PATH="${PREFIX}/include"
+#export CFLAGS="${CFLAGS} -O3 -fcommon"
+#export CXXFLAGS="${CFLAGS} -O3 -fcommon -I${PREFIX}/include -D_LIBCPP_DISABLE_AVAILABILITY"
 
 case $(uname) in
 	Linux)
@@ -16,5 +16,6 @@ case $(uname) in
 		;;
 esac
 
+mkdir -p ${PREFIX}/bin ${PREFIX}/share
 cd assembler
-PREFIX="${PREFIX}" bash spades_compile.sh "${THREADS}" -DSPADES_ENABLE_PROJECTS="all"
+./spades_compile.sh "${THREADS}"

recipes/cloudspades/meta.yaml

@@ -11,7 +11,7 @@ source:
   sha256: {{ sha256 }}
 
 build:
-  number: 1
+  number: 2
   skip: True  # [osx]
   run_exports:
     - {{ pin_subpackage('cloudspades', max_pin="x") }}
@@ -50,7 +50,5 @@ about:
   doc_url: "https://github.com/ablab/spades/tree/cloudspades-ismb"
 
 extra:
-  additional-platforms:
-    - linux-aarch64
   recipe-maintainers:
     - pdimens