gemma 0.98 (#11254)

* gemma 0.98

* gemma 0.98

Leave gsl and zlib out of runtime dependencies

recipes/gemma/build.sh

@@ -0,0 +1,15 @@
+#!/bin/bash
+set -eu
+
+export C_INCLUDE_PATH=${PREFIX}/include
+export CPP_INCLUDE_PATH=${PREFIX}/include
+export LIBRARY_PATH=${PREFIX}/lib
+
+if [ "$(uname)" == "Darwin" ]; then
+    make EIGEN_INCLUDE_PATH=${PREFIX}/include/eigen3 CXX=clang++
+else
+    make EIGEN_INCLUDE_PATH=${PREFIX}/include/eigen3
+fi
+
+mkdir -p ${PREFIX}/bin
+cp bin/gemma ${PREFIX}/bin/gemma

recipes/gemma/meta.yaml

@@ -0,0 +1,33 @@
+{% set version='0.98' %}
+package:
+  name: gemma
+  version: {{ version }}
+
+# There are no OSX binaries yet, so just build on both platforms
+source:
+  # Using a specific git checkout of 0.98 because of a minor fix in the Makefile
+  url: https://github.com/genetics-statistics/GEMMA/archive/93bdcb038b74b311d3a040f44606c25f5f9b20f9.tar.gz
+  sha256: beb3f5a57ee5d99fc48c3fec11ad8c95ee66053cd5b0bfa417881a77138f2ed6
+
+build:
+  number: 0
+
+requirements:
+  build:
+    - {{ compiler('cxx') }}
+  host:
+    - openblas
+    - eigen
+    - gsl
+    - zlib
+  run:
+    - openblas
+
+test:
+  commands:
+    - gemma
+
+about:
+  home: https://github.com/genetics-statistics/GEMMA
+  license: GPLv3
+  summary: Linear mixed models (LMMs) for genome-wide association (GWA)