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PacBio: Initial addition of pbsv (#10320)
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pb-dseifert authored Aug 8, 2018
1 parent b0409a7 commit 68fa218
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5 changes: 5 additions & 0 deletions recipes/pbsv/build.sh
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#!/usr/bin/env bash

mkdir -p "${PREFIX}"/bin
cp pbsv "${PREFIX}"/bin/
chmod +x "${PREFIX}"/bin/pbsv
34 changes: 34 additions & 0 deletions recipes/pbsv/meta.yaml
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{% set name = "pbsv" %}
{% set version = "2.0.0" %}
{% set sha256 = "b36969a623aae43b56e685f7aa72b1c3a105082e84f81a0cf2d1e6e5d3769c33" %}

package:
name: {{ name }}
version: {{ version }}

source:
url: https://github.com/PacificBiosciences/pbsv/releases/download/v{{ version }}/pbsv # [linux]
sha256: {{ sha256 }} # [linux]

about:
home: https://github.com/PacificBiosciences/pbsv
license: Pacific Biosciences Proprietary
summary: "pbsv - Calling All Variants: Fast, Accurate, Population-Scale Structural Variant Analysis from Single-Molecule PacBio Reads"

extra:
recipe-maintainers:
- armintoepfer
- pb-dseifert
- mhsieh

build:
number: 0
skip: True # [osx]

requirements:
run:
- minimap2 >=2.11

test:
commands:
- pbsv -h

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