add msisensor

recipes/msisensor/build.sh

@@ -0,0 +1,6 @@
+export CPATH=${PREFIX}/include
+export INCLUDES="-I$PREFIX/include -I$PREFIX/include/ncurses"
+export LDFLAGS="-L$PREFIX/lib -ltinfo"
+export LIBRARY_PATH=${PREFIX}/lib
+make
+cp msisensor $PREFIX/bin

recipes/msisensor/meta.yaml

@@ -0,0 +1,38 @@
+{% set version = "0.5" %}
+
+package:
+  name: msisensor
+  version: {{ version }}
+
+build:
+  skip: True # [osx]
+  number: 0
+
+source:
+  url: https://github.com/niu-lab/msisensor/archive/v{{ version }}.tar.gz
+  sha256: d2142ca4345901a4e23b8779615d88772bdb62ec3e58fdb5078e92470c40b44f
+
+requirements:
+  build:
+    - {{ compiler('c') }}
+    - {{ compiler('cxx') }}
+
+  host:
+    - zlib
+    - openmp
+    - ncurses
+
+  run:
+    - zlib
+    - openmp
+    - ncurses
+
+about:
+  home: https://github.com/ding-lab/msisensor
+  license: MIT
+  summary: MSIsensor is a C++ program to detect replication slippage variants at microsatellite regions, and differentiate them as somatic or germline. 
+
+test:
+  commands:
+     - "msisensor msi -h 2>&1 | grep Usage"
+     - "msisensor scan -h 2>&1 | grep Usage"