New recipe: Slamdunk #10199
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| #!/bin/bash | ||
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| python setup.py install --single-version-externally-managed --record=record.txt | ||
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| {% set version = "0.3.1" %} | ||
| {% set sha256 = "2cc5d561ef2c3014595b646858ae2fa76c3d3972a2b624dd5d01eb82ac239c28" %} | ||
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| package: | ||
| name: slamdunk | ||
| version: {{ version }} | ||
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| source: | ||
| sha256: '{{sha256}}' | ||
| url: "https://github.com/t-neumann/slamdunk/archive/v0.3.1.tar.gz" | ||
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| build: | ||
| entry_points: | ||
| - slamdunk=slamdunk.slamdunk:run | ||
| - alleyoop=slamdunk.alleyoop:run | ||
| - splash=slamdunk.splash:run | ||
| number: 0 | ||
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| requirements: | ||
| build: | ||
| - {{ compiler('cxx') }} | ||
| - cmake | ||
| - wget | ||
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| host: | ||
| - python=2.7 | ||
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There was a problem hiding this comment. please skip python 3 build in the build/skip section. There was a problem hiding this comment. This should suffice right? There was a problem hiding this comment. Whenever I skip python3 build, it won't build my package anymore. Neither nor works. So I'm leaving this for now. |
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| - setuptools | ||
| - joblib >=0.9.4 | ||
| - pybedtools >=0.6.4 | ||
| - intervaltree >=2.1.0 | ||
| - pandas >=0.13.1 | ||
| - biopython >=1.63 | ||
| - pysam >=0.8.3 | ||
| - cython >=0.20.1 | ||
| - zlib | ||
| - openjdk | ||
| - r-base | ||
| - ncurses | ||
| - zlib | ||
| - bzip2 | ||
| - curl | ||
| - xz | ||
| - libdeflate | ||
| run: | ||
| - python=2.7 | ||
| - joblib >=0.9.4 | ||
| - pybedtools >=0.6.4 | ||
| - intervaltree >=2.1.0 | ||
| - pandas >=0.13.1 | ||
| - biopython >=1.63 | ||
| - pysam >=0.8.3 | ||
| - cython >=0.20.1 | ||
| - zlib | ||
| - openjdk | ||
| - r-base | ||
| - ncurses | ||
| - zlib | ||
| - bzip2 | ||
| - curl | ||
| - xz | ||
| - libdeflate | ||
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| test: | ||
| imports: | ||
| - slamdunk | ||
| - slamdunk.contrib | ||
| - slamdunk.dunks | ||
| - slamdunk.plot | ||
| - slamdunk.slamseq | ||
| - slamdunk.test | ||
| - slamdunk.utils | ||
| commands: | ||
| - slamdunk --help | ||
| - alleyoop --help | ||
| - splash --help | ||
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| about: | ||
| home: "http://t-neumann.github.io/slamdunk" | ||
| license: GNU Affero General Public License v3 (AGPLv3) | ||
| license_file: LICENSE | ||
| summary: "SlamDunk is a novel, fully automated software tool for automated, robust, scalable and reproducible SLAMseq data analysis." | ||
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please use pip install, have a look here:
bioconda-recipes/recipes/pymzml/0.7.5/meta.yaml
Line 12 in 31f2bc3