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Remove various packages from the blacklist #10280

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merged 3 commits into from
Aug 7, 2018
Merged

Remove various packages from the blacklist #10280

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4d24fc9
Remove various packages from the blacklist
dpryan79 Aug 6, 2018
ed2870a
Tepid gave a rather tepid response
dpryan79 Aug 6, 2018
4d1cf13
Merge branch 'master' into dpryan79_fixes_060818_1
dpryan79 Aug 7, 2018
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9 changes: 0 additions & 9 deletions build-fail-blacklist
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Expand Up @@ -1598,9 +1598,6 @@ recipes/infernal/1.0.2
# PREFIX/lib is a directory
recipes/proot

# python package pytz missing
recipes/samsifter

recipes/java-jdk/7.0.91
# /opt/conda/conda-bld/kat_1530056226354/test_tmp/run_test.sh: line 7: 8288 Aborted (core dumped) kat --version
recipes/kat/2.3.4
Expand Down Expand Up @@ -1776,12 +1773,6 @@ recipes/allegro
# broken pipe
recipes/antarna

# missing gfortran
recipes/tepid
recipes/ig-checkflowtypes
recipes/epicseg


#gff.h missing
recipes/gffcompare

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2 changes: 1 addition & 1 deletion recipes/samsifter/build.sh
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@@ -1,6 +1,6 @@
#!/bin/bash

$PYTHON setup.py install
$PYTHON setup.py install --single-version-externally-managed --record=record.txt

# Add more build steps here, if they are necessary.

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8 changes: 7 additions & 1 deletion recipes/tepid/meta.yaml
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Expand Up @@ -11,16 +11,17 @@ package:
name: tepid
version: '0.8'

# numpy 1.9.2 was built against libgfortran 1.9.2
requirements:
build:
- {{ compiler('c') }}
- {{ compiler('fortran') }}
host:
- python
- setuptools
- 'pysam <0.9,>0.8'
- pybedtools
- numpy ==1.9.2
- libgfortran ==1.0
- pandas
- nose
- samtools ==1.2
Expand All @@ -29,6 +30,7 @@ requirements:
- python
- pybedtools
- numpy ==1.9.2
- libgfortran ==1.0
- pandas
- 'pysam <0.9,>0.8'
- nose
Expand All @@ -47,3 +49,7 @@ test:
- tepid-map | grep data
- tepid-discover --version
- tepid-refine --version

extra:
skip-lints:
- should_use_compilers