Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Unblacklist some other perl-bio-* #10358

Merged
merged 3 commits into from
Aug 9, 2018
Merged

Unblacklist some other perl-bio-* #10358

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
3 commits
Select commit Hold shift + click to select a range
5521a79
Unblacklist some other perl-bio-*
abretaud Aug 9, 2018
14642d8
disable for now
abretaud Aug 9, 2018
7dfcf7a
mac perm
abretaud Aug 9, 2018
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
5 changes: 2 additions & 3 deletions build-fail-blacklist
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -1943,6 +1943,8 @@ recipes/perl-mldbm-sync
recipes/perl-pod-checker/1.60
recipes/perl-unicode-normalize/1.17

recipes/perl-bio-db-sam

# /opt/conda/conda-bld/pash_1531691261758/_test_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_place/lib/ruby/2.4.0/rubygems/core_ext/kernel_require.rb:55:in `require': cannot load such file -- brl/util/textFileUtil (LoadError)
recipes/pash

Expand Down Expand Up @@ -2031,10 +2033,7 @@ recipes/mreps
# np-likeness scorer no such file or directory
recipes/np-likeness-scorer

recipes/perl-bio-cigar
recipes/perl-bio-db-sam
recipes/perl-datetime-format-strptime/1.73
recipes/perl-bio-eutilities
recipes/perl-moose/2.2009
recipes/mlst/2.9
recipes/perl-sanger-cgp-vagrent
Expand Down
2 changes: 1 addition & 1 deletion recipes/perl-bio-cigar/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@ source:


build:
number: 1
number: 2

requirements:
host:
Expand Down
2 changes: 1 addition & 1 deletion recipes/perl-bio-db-sam/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ source:
sha256: b5d7ca16c96cc9fbee5daceb3268f36011740fe4de92074c17a729bac57c3077

build:
number: 3
number: 4
skip: True # [osx]

requirements:
Expand Down
2 changes: 2 additions & 0 deletions recipes/perl-bio-eutilities/build.sh
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -17,3 +17,5 @@ else
echo 'Unable to find Build.PL or Makefile.PL. You need to modify build.sh.'
exit 1
fi

chmod u+rwx $PREFIX/bin/*
6 changes: 3 additions & 3 deletions recipes/perl-bio-eutilities/meta.yaml
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -7,13 +7,13 @@ source:
md5: 8814608d46fc6517814f320766c24739

build:
number: 1
number: 2

# commented versions are tested as working
requirements:
host:
- perl
- perl-bioperl ==1.6.924
- perl-bioperl
- perl-test-most #==0.34
- perl-test-differences #==0.64
- perl-text-diff #==1.44
Expand All @@ -37,7 +37,7 @@ requirements:

run:
- perl
- perl-bioperl ==1.6.924
- perl-bioperl
- perl-test-most #==0.34
- perl-test-differences #==0.64
- perl-text-diff #==1.44
Expand Down