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Improve Changeo recipe #12139

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Improve Changeo recipe #12139

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5e3ac78
EDIT about section
PertuyF Nov 18, 2018
df68645
ADD noarch generic
PertuyF Nov 18, 2018
5dfe752
Update noarch to python
PertuyF Nov 23, 2018
bfcf1d0
Clean host requirements
PertuyF Nov 23, 2018
8879165
Add test for scripts
PertuyF Nov 23, 2018
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25 changes: 13 additions & 12 deletions recipes/changeo/meta.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -10,21 +10,14 @@ source:
sha256: 7d19ac3873acf83abe6115b7f4787629a622b0fc3095e8a3ab4b35a675d163e2

build:
noarch: python
number: 0
script: "{{ PYTHON }} -m pip install . --no-deps --ignore-installed -vvv "

requirements:
host:
- airr >=1.2.1
- biopython >=1.65
- numpy >=1.8
- pandas >=0.15
- pip
- presto >=0.5.10
- python
- pyyaml >=3.12
- scipy >=0.14
- setuptools >=2.0
run:
- airr >=1.2.1
- biopython >=1.65
Expand All @@ -39,15 +32,23 @@ requirements:
test:
imports:
- changeo
commands:
- AlignRecords.py --version
- AssignGenes.py --version
- BuildTrees.py --version
- ConvertDb.py --version
- CreateGermlines.py --version
- DefineClones.py --version
- MakeDb.py --version
- ParseDb.py --version


about:
home: http://changeo.readthedocs.io
license: Creative Commons Attribution-ShareAlike 4.0 International (CC BY-SA 4.0)
license_family: CC
license_file:
summary: A bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data.
doc_url:
dev_url:
summary: 'A bioinformatics toolkit for processing high-throughput lymphocyte receptor sequencing data.
Citations: Gupta, et al (2015) <doi:10.1093/bioinformatics/btv359>.'

extra:
recipe-maintainers:
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