Add recipe for libstatgen-1.0.5

[dfornika]

• I have read the guidelines for bioconda recipes.
• This PR adds a new recipe.
• AFAIK, this recipe is directly relevant to the biological sciences (otherwise, please submit to the more general purpose conda-forge channel).
• This PR updates an existing recipe.
• This PR does something else (explain below).

[dfornika]

Build is failing with this message:

SamReferenceInfo.h:21:25: fatal error: StringArray.h: No such file or directory

 #include "StringArray.h"

I think the problem is that during the build, symbolic links to StringArray.h and other headers are created in the include directory of the source repo. But the compiler isn't looking them there while compiling SamFileHeader.cpp.

[npavlovikj]

@dfornika , is there a reason you are not building the newest 1.0.14 version of libstatgen ?

[npavlovikj]

@dfornika , I didn't have the permission to push to your branch, so I opened a new PR here, #12348.

[dfornika]

Thanks @npavlovikj. I'm interested in this pipeline: https://github.com/CPTR-ReSeqTB/UVP, which lists 'Fastqvalidator Version 1.0.5' as a dependency. There is no 1.0.5 release of fastQValidator, but there is a 1.0.5 release of the libStatGen library that fastQValidator uses.

But I guess that isn't really a safe assumption, since fastQValidator pulls in libStatGen with a simple git clone of the master branch during its build process.

@mezewudo Could you comment on exactly what you're referring to when you list 'Fastqvalidator Version 1.0.5' as a dependency of https://github.com/CPTR-ReSeqTB/UVP?

[mezewudo]

You are right, there is no FastqValidator Version 1.0.5, there is only a libStatGen library release of 1.0.5. I will update the UVP GitHub readme document to reflect the accurate version of fastQvalidator implemented --- Version 0.1.1

…

On Tue, Nov 27, 2018 at 11:14 AM Dan Fornika ***@***.***> wrote: Thanks @npavlovikj <https://github.com/npavlovikj>. I'm interested in this pipeline: https://github.com/CPTR-ReSeqTB/UVP, which lists 'Fastqvalidator Version 1.0.5' as a dependency. There is no 1.0.5 release of fastQValidator, but there is a 1.0.5 release of the libStatGen library that fastQValidator uses. But I guess that isn't really a safe assumption, since fastQValidator pulls in libStatGen with a simple git clone of the master branch during its build process. @mezewudo <https://github.com/mezewudo> Could you comment on exactly what you're referring to when you list 'Fastqvalidator Version 1.0.5' as a dependency of https://github.com/CPTR-ReSeqTB/UVP? — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub <#12342 (comment)>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AFLYb6OSqqYK2G0U6_TRPIxPhppU8K_Uks5uzYDrgaJpZM4YzwOo> .

[dfornika]

This recipe was added in #12348